Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM249Q2WGJ8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM249Q2WGJ8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM249Q2WGJ8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
TMEM249Q2WGJ8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM249Q2WGJ8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 RARRES2P1-201ENST00000474487 481 ntBASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM249Q2WGJ8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM249Q2WGJ8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM249Q2WGJ8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM249Q2WGJ8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 AL157400.5-201ENST00000507624 621 ntBASIC20.95■□□□□ 0.94
TMEM249Q2WGJ8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM249Q2WGJ8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 AC007029.1-201ENST00000604183 313 ntBASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM249Q2WGJ8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM249Q2WGJ8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
TMEM249Q2WGJ8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM249Q2WGJ8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM249Q2WGJ8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.91■□□□□ 0.94
TMEM249Q2WGJ8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
TMEM249Q2WGJ8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TMEM249Q2WGJ8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 AC129492.7-201ENST00000622992 756 ntBASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM249Q2WGJ8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM249Q2WGJ8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM249Q2WGJ8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM249Q2WGJ8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM249Q2WGJ8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM249Q2WGJ8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM249Q2WGJ8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM249Q2WGJ8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TMEM249Q2WGJ8 AC133552.2-201ENST00000619106 1032 ntBASIC20.87■□□□□ 0.93
TMEM249Q2WGJ8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM249Q2WGJ8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM249Q2WGJ8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 AL592293.1-201ENST00000502889 1188 ntBASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 DUX4L18-201ENST00000553347 1267 ntBASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TMEM249Q2WGJ8 AC009831.1-201ENST00000580420 1582 ntBASIC20.85■□□□□ 0.93
TMEM249Q2WGJ8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM249Q2WGJ8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms