Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 KAE1YKR038C 1161 nt7.13□□□□□ -1.27
RUP1Q12242 GPH1YPR160W 2709 nt7.12□□□□□ -1.27
RUP1Q12242 YML034C-AYML034C-A 399 nt7.12□□□□□ -1.27
RUP1Q12242 SNT309YPR101W 528 nt7.12□□□□□ -1.27
RUP1Q12242 TAH11YJR046W 1815 nt7.11□□□□□ -1.27
RUP1Q12242 RDR1YOR380W 1641 nt7.1□□□□□ -1.27
RUP1Q12242 PHO85YPL031C 918 nt7.1□□□□□ -1.27
RUP1Q12242 ERV2YPR037C 591 nt7.1□□□□□ -1.27
RUP1Q12242 SMK1YPR054W 1167 nt7.1□□□□□ -1.27
RUP1Q12242 GSH1YJL101C 2037 nt7.1□□□□□ -1.27
RUP1Q12242 AMN1YBR158W 1650 nt7.09□□□□□ -1.27
RUP1Q12242 CRN1YLR429W 1956 nt7.09□□□□□ -1.27
RUP1Q12242 CDC7YDL017W 1524 nt7.08□□□□□ -1.28
RUP1Q12242 STS1YIR011C 960 nt7.08□□□□□ -1.28
RUP1Q12242 PSA1YDL055C 1086 nt7.07□□□□□ -1.28
RUP1Q12242 YOR268CYOR268C 399 nt7.07□□□□□ -1.28
RUP1Q12242 TDP1YBR223C 1635 nt7.07□□□□□ -1.28
RUP1Q12242 RSP5YER125W 2430 nt7.07□□□□□ -1.28
RUP1Q12242 CCT3YJL014W 1605 nt7.06□□□□□ -1.28
RUP1Q12242 RPL2BYIL018W 765 nt7.06□□□□□ -1.28
RUP1Q12242 NCA3YJL116C 1014 nt7.06□□□□□ -1.28
RUP1Q12242 YPT10YBR264C 600 nt7.06□□□□□ -1.28
RUP1Q12242 YEL023CYEL023C 2049 nt7.06□□□□□ -1.28
RUP1Q12242 ACO1YLR304C 2337 nt7.06□□□□□ -1.28
RUP1Q12242 SPS1YDR523C 1473 nt7.05□□□□□ -1.28
RUP1Q12242 ERS1YCR075C 783 nt7.05□□□□□ -1.28
RUP1Q12242 YJR142WYJR142W 1029 nt7.05□□□□□ -1.28
RUP1Q12242 YLR358CYLR358C 564 nt7.05□□□□□ -1.28
RUP1Q12242 YMR074CYMR074C 438 nt7.05□□□□□ -1.28
RUP1Q12242 ADH6YMR318C 1083 nt7.05□□□□□ -1.28
RUP1Q12242 YPR127WYPR127W 1038 nt7.05□□□□□ -1.28
RUP1Q12242 ERG12YMR208W 1332 nt7.04□□□□□ -1.28
RUP1Q12242 SKY1YMR216C 2229 nt7.04□□□□□ -1.28
RUP1Q12242 VTS1YOR359W 1572 nt7.03□□□□□ -1.28
RUP1Q12242 EMP65YER140W 1671 nt7.03□□□□□ -1.28
RUP1Q12242 YLL066CYLL066C 3618 nt7.03□□□□□ -1.28
RUP1Q12242 YAL045CYAL045C 309 nt7.03□□□□□ -1.28
RUP1Q12242 HBN1YCL026C-B 582 nt7.03□□□□□ -1.28
RUP1Q12242 PGI1YBR196C 1665 nt7.03□□□□□ -1.28
RUP1Q12242 SUF3tG(CCC)D 72 nt7.02□□□□□ -1.29
RUP1Q12242 DSC3YOR223W 879 nt7.02□□□□□ -1.29
RUP1Q12242 OPI11YPR044C 354 nt7.02□□□□□ -1.29
RUP1Q12242 MSI1YBR195C 1269 nt7.02□□□□□ -1.29
RUP1Q12242 ARP3YJR065C 1350 nt7.02□□□□□ -1.29
RUP1Q12242 CLN1YMR199W 1641 nt7.01□□□□□ -1.29
RUP1Q12242 MLS1YNL117W 1665 nt7.01□□□□□ -1.29
RUP1Q12242 YBR241CYBR241C 1467 nt7.01□□□□□ -1.29
RUP1Q12242 HRB1YNL004W 1365 nt7.01□□□□□ -1.29
RUP1Q12242 NMA2YGR010W 1188 nt7.01□□□□□ -1.29
RUP1Q12242 MIX17YMR002W 471 nt7□□□□□ -1.29
RUP1Q12242 OSM1YJR051W 1506 nt7□□□□□ -1.29
RUP1Q12242 BDF2YDL070W 1917 nt6.99□□□□□ -1.29
RUP1Q12242 YGL081WYGL081W 963 nt6.99□□□□□ -1.29
RUP1Q12242 SUR7YML052W 909 nt6.99□□□□□ -1.29
RUP1Q12242 CEM1YER061C 1329 nt6.99□□□□□ -1.29
RUP1Q12242 DOC1YGL240W 753 nt6.98□□□□□ -1.29
RUP1Q12242 MRPL28YDR462W 444 nt6.97□□□□□ -1.29
RUP1Q12242 PIH1YHR034C 1035 nt6.97□□□□□ -1.29
RUP1Q12242 CTF8YHR191C 402 nt6.97□□□□□ -1.29
RUP1Q12242 MGM101YJR144W 810 nt6.97□□□□□ -1.29
RUP1Q12242 ERG27YLR100W 1044 nt6.97□□□□□ -1.29
RUP1Q12242 SLA2YNL243W 2907 nt6.97□□□□□ -1.29
RUP1Q12242 RPL43AYPR043W 279 nt6.97□□□□□ -1.29
RUP1Q12242 IRC5YFR038W 2562 nt6.97□□□□□ -1.29
RUP1Q12242 ECM38YLR299W 1983 nt6.97□□□□□ -1.29
RUP1Q12242 DLD1YDL174C 1764 nt6.96□□□□□ -1.3
RUP1Q12242 PIL1YGR086C 1020 nt6.96□□□□□ -1.3
RUP1Q12242 YNR014WYNR014W 639 nt6.96□□□□□ -1.3
RUP1Q12242 ATP23YNR020C 813 nt6.96□□□□□ -1.3
RUP1Q12242 YJL045WYJL045W 1905 nt6.95□□□□□ -1.3
RUP1Q12242 GUT1YHL032C 2130 nt6.95□□□□□ -1.3
RUP1Q12242 SKP1YDR328C 585 nt6.95□□□□□ -1.3
RUP1Q12242 COX16YJL003W 357 nt6.95□□□□□ -1.3
RUP1Q12242 OPI8YKR035C 642 nt6.95□□□□□ -1.3
RUP1Q12242 PRE5YMR314W 705 nt6.95□□□□□ -1.3
RUP1Q12242 HOG1YLR113W 1308 nt6.95□□□□□ -1.3
RUP1Q12242 ECM27YJR106W 2178 nt6.95□□□□□ -1.3
RUP1Q12242 MFG1YDL233W 1377 nt6.95□□□□□ -1.3
RUP1Q12242 MSG5YNL053W 1470 nt6.94□□□□□ -1.3
RUP1Q12242 HSP12YFL014W 330 nt6.94□□□□□ -1.3
RUP1Q12242 ECM30YLR436C 3825 nt6.93□□□□□ -1.3
RUP1Q12242 THR1YHR025W 1074 nt6.93□□□□□ -1.3
RUP1Q12242 YJL213WYJL213W 996 nt6.93□□□□□ -1.3
RUP1Q12242 PPH22YDL188C 1134 nt6.92□□□□□ -1.3
RUP1Q12242 FPR2YDR519W 408 nt6.92□□□□□ -1.3
RUP1Q12242 RDN5-2RDN5-2 119 nt6.92□□□□□ -1.3
RUP1Q12242 RDN5-3RDN5-3 119 nt6.92□□□□□ -1.3
RUP1Q12242 RDN5-4RDN5-4 119 nt6.92□□□□□ -1.3
RUP1Q12242 RDN5-5RDN5-5 119 nt6.92□□□□□ -1.3
RUP1Q12242 GLN3YER040W 2193 nt6.91□□□□□ -1.3
RUP1Q12242 CCW12YLR110C 402 nt6.91□□□□□ -1.3
RUP1Q12242 CBK1YNL161W 2271 nt6.9□□□□□ -1.3
RUP1Q12242 SKI2YLR398C 3864 nt6.9□□□□□ -1.3
RUP1Q12242 YML079WYML079W 606 nt6.9□□□□□ -1.3
RUP1Q12242 STF1YDL130W-A 261 nt6.89□□□□□ -1.31
RUP1Q12242 PET117YER058W 324 nt6.89□□□□□ -1.31
RUP1Q12242 CTA1YDR256C 1548 nt6.88□□□□□ -1.31
RUP1Q12242 PUP2YGR253C 783 nt6.88□□□□□ -1.31
RUP1Q12242 SDH8YBR269C 417 nt6.88□□□□□ -1.31
RUP1Q12242 GTT3YEL017W 1014 nt6.87□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms