Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB8AP61006 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
RAB8AP61006 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB8AP61006 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB8AP61006 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB8AP61006 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB8AP61006 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB8AP61006 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB8AP61006 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
RAB8AP61006 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB8AP61006 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB8AP61006 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB8AP61006 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB8AP61006 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB8AP61006 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.78■■□□□ 1.4
RAB8AP61006 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB8AP61006 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RAB8AP61006 MIR4449-201ENST00000578365 66 ntBASIC23.77■■□□□ 1.4
RAB8AP61006 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RAB8AP61006 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB8AP61006 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB8AP61006 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB8AP61006 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.76■■□□□ 1.39
RAB8AP61006 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB8AP61006 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RAB8AP61006 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.74■■□□□ 1.39
RAB8AP61006 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB8AP61006 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB8AP61006 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.74■■□□□ 1.39
RAB8AP61006 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.74■■□□□ 1.39
RAB8AP61006 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RAB8AP61006 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB8AP61006 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB8AP61006 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RAB8AP61006 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB8AP61006 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RAB8AP61006 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RAB8AP61006 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.72■■□□□ 1.39
RAB8AP61006 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB8AP61006 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RAB8AP61006 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RAB8AP61006 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB8AP61006 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB8AP61006 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB8AP61006 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB8AP61006 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB8AP61006 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB8AP61006 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.71■■□□□ 1.39
RAB8AP61006 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAB8AP61006 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.71■■□□□ 1.39
RAB8AP61006 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RAB8AP61006 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.7■■□□□ 1.39
RAB8AP61006 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB8AP61006 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB8AP61006 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB8AP61006 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.7■■□□□ 1.38
RAB8AP61006 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB8AP61006 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAB8AP61006 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RAB8AP61006 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB8AP61006 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RAB8AP61006 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB8AP61006 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB8AP61006 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.69■■□□□ 1.38
RAB8AP61006 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.69■■□□□ 1.38
RAB8AP61006 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RAB8AP61006 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB8AP61006 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAB8AP61006 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.68■■□□□ 1.38
RAB8AP61006 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.68■■□□□ 1.38
RAB8AP61006 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAB8AP61006 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAB8AP61006 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.67■■□□□ 1.38
RAB8AP61006 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
RAB8AP61006 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RAB8AP61006 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAB8AP61006 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAB8AP61006 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAB8AP61006 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAB8AP61006 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RAB8AP61006 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB8AP61006 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.66■■□□□ 1.38
RAB8AP61006 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.65■■□□□ 1.38
RAB8AP61006 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB8AP61006 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
RAB8AP61006 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.65■■□□□ 1.38
RAB8AP61006 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAB8AP61006 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.65■■□□□ 1.38
RAB8AP61006 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms