Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PRRX1P54821 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.41■□□□□ 0.86
PRRX1P54821 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRRX1P54821 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRRX1P54821 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
PRRX1P54821 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.4■□□□□ 0.86
PRRX1P54821 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PRRX1P54821 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRRX1P54821 MIR639-201ENST00000384974 98 ntBASIC20.39■□□□□ 0.85
PRRX1P54821 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.39■□□□□ 0.85
PRRX1P54821 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.39■□□□□ 0.85
PRRX1P54821 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.39■□□□□ 0.85
PRRX1P54821 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PRRX1P54821 HLA-V-202ENST00000446817 847 ntBASIC20.38■□□□□ 0.85
PRRX1P54821 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PRRX1P54821 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRRX1P54821 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRRX1P54821 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PRRX1P54821 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PRRX1P54821 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.37■□□□□ 0.85
PRRX1P54821 MIR219A2-201ENST00000608502 1504 ntBASIC20.37■□□□□ 0.85
PRRX1P54821 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRRX1P54821 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRRX1P54821 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRRX1P54821 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.34■□□□□ 0.85
PRRX1P54821 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRRX1P54821 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRRX1P54821 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRRX1P54821 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRRX1P54821 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.34■□□□□ 0.85
PRRX1P54821 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRRX1P54821 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRRX1P54821 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRRX1P54821 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRRX1P54821 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.33■□□□□ 0.85
PRRX1P54821 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRRX1P54821 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PRRX1P54821 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRRX1P54821 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRRX1P54821 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRRX1P54821 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.33■□□□□ 0.84
PRRX1P54821 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRRX1P54821 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PRRX1P54821 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRRX1P54821 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRRX1P54821 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRRX1P54821 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRRX1P54821 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRRX1P54821 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.31■□□□□ 0.84
PRRX1P54821 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.31■□□□□ 0.84
PRRX1P54821 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.31■□□□□ 0.84
PRRX1P54821 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRRX1P54821 AC135731.1-201ENST00000569415 2548 ntBASIC20.31■□□□□ 0.84
PRRX1P54821 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.3■□□□□ 0.84
PRRX1P54821 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRRX1P54821 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRRX1P54821 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.3■□□□□ 0.84
PRRX1P54821 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.3■□□□□ 0.84
PRRX1P54821 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRRX1P54821 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRRX1P54821 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRRX1P54821 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.29■□□□□ 0.84
PRRX1P54821 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRRX1P54821 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PRRX1P54821 AC126177.7-201ENST00000547904 679 ntBASIC20.29■□□□□ 0.84
PRRX1P54821 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.29■□□□□ 0.84
PRRX1P54821 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.29■□□□□ 0.84
PRRX1P54821 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PRRX1P54821 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PRRX1P54821 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PRRX1P54821 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRRX1P54821 WHAMMP3-201ENST00000611636 1609 ntBASIC20.28■□□□□ 0.84
PRRX1P54821 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRRX1P54821 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRRX1P54821 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRRX1P54821 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRRX1P54821 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRRX1P54821 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PRRX1P54821 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRRX1P54821 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.27■□□□□ 0.83
PRRX1P54821 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRRX1P54821 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.26■□□□□ 0.83
PRRX1P54821 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PRRX1P54821 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRRX1P54821 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.26■□□□□ 0.83
PRRX1P54821 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms