Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 ERG24YNL280C 1317 nt6.31□□□□□ -1.4
UFD1P53044 SPS1YDR523C 1473 nt6.31□□□□□ -1.4
UFD1P53044 PET494YNR045W 1470 nt6.31□□□□□ -1.4
UFD1P53044 PSA1YDL055C 1086 nt6.31□□□□□ -1.4
UFD1P53044 QCR6YFR033C 444 nt6.31□□□□□ -1.4
UFD1P53044 TPK1YJL164C 1194 nt6.31□□□□□ -1.4
UFD1P53044 AIM2YAL049C 741 nt6.31□□□□□ -1.4
UFD1P53044 ERV2YPR037C 591 nt6.31□□□□□ -1.4
UFD1P53044 SKY1YMR216C 2229 nt6.3□□□□□ -1.4
UFD1P53044 SNF4YGL115W 969 nt6.3□□□□□ -1.4
UFD1P53044 HMS2YJR147W 1077 nt6.3□□□□□ -1.4
UFD1P53044 LIP5YOR196C 1245 nt6.3□□□□□ -1.4
UFD1P53044 YPT10YBR264C 600 nt6.3□□□□□ -1.4
UFD1P53044 AFG3YER017C 2286 nt6.29□□□□□ -1.4
UFD1P53044 PAC10YGR078C 600 nt6.29□□□□□ -1.4
UFD1P53044 YLR112WYLR112W 420 nt6.29□□□□□ -1.4
UFD1P53044 Q0010Q0010 387 nt6.29□□□□□ -1.4
UFD1P53044 NUP57YGR119C 1626 nt6.28□□□□□ -1.4
UFD1P53044 VMA2YBR127C 1554 nt6.28□□□□□ -1.4
UFD1P53044 STS1YIR011C 960 nt6.28□□□□□ -1.4
UFD1P53044 YOR012WYOR012W 414 nt6.28□□□□□ -1.4
UFD1P53044 DSC3YOR223W 879 nt6.28□□□□□ -1.4
UFD1P53044 CDC3YLR314C 1563 nt6.27□□□□□ -1.41
UFD1P53044 SRF1YDL133W 1314 nt6.26□□□□□ -1.41
UFD1P53044 CLN1YMR199W 1641 nt6.25□□□□□ -1.41
UFD1P53044 YJR142WYJR142W 1029 nt6.25□□□□□ -1.41
UFD1P53044 KAE1YKR038C 1161 nt6.25□□□□□ -1.41
UFD1P53044 HRB1YNL004W 1365 nt6.23□□□□□ -1.41
UFD1P53044 SKP1YDR328C 585 nt6.23□□□□□ -1.41
UFD1P53044 HHY1YEL059W 309 nt6.23□□□□□ -1.41
UFD1P53044 OSM1YJR051W 1506 nt6.23□□□□□ -1.41
UFD1P53044 RSP5YER125W 2430 nt6.23□□□□□ -1.41
UFD1P53044 NOG2YNR053C 1461 nt6.22□□□□□ -1.41
UFD1P53044 ERP2YAL007C 648 nt6.22□□□□□ -1.41
UFD1P53044 MHP1YJL042W 4197 nt6.21□□□□□ -1.41
UFD1P53044 RQC1YDR333C 2172 nt6.21□□□□□ -1.41
UFD1P53044 MFG1YDL233W 1377 nt6.21□□□□□ -1.41
UFD1P53044 NMA2YGR010W 1188 nt6.21□□□□□ -1.42
UFD1P53044 NCA3YJL116C 1014 nt6.21□□□□□ -1.42
UFD1P53044 YJR154WYJR154W 1041 nt6.21□□□□□ -1.42
UFD1P53044 TKL2YBR117C 2046 nt6.2□□□□□ -1.42
UFD1P53044 KIN1YDR122W 3195 nt6.2□□□□□ -1.42
UFD1P53044 YLR358CYLR358C 564 nt6.2□□□□□ -1.42
UFD1P53044 PRE5YMR314W 705 nt6.2□□□□□ -1.42
UFD1P53044 EXG2YDR261C 1689 nt6.2□□□□□ -1.42
UFD1P53044 SEC23YPR181C 2307 nt6.19□□□□□ -1.42
UFD1P53044 RDR1YOR380W 1641 nt6.19□□□□□ -1.42
UFD1P53044 PIL1YGR086C 1020 nt6.19□□□□□ -1.42
UFD1P53044 MSI1YBR195C 1269 nt6.19□□□□□ -1.42
UFD1P53044 FRE5YOR384W 2085 nt6.18□□□□□ -1.42
UFD1P53044 YJL213WYJL213W 996 nt6.18□□□□□ -1.42
UFD1P53044 CCW12YLR110C 402 nt6.18□□□□□ -1.42
UFD1P53044 NUP84YDL116W 2181 nt6.18□□□□□ -1.42
UFD1P53044 EFM1YHL039W 1758 nt6.18□□□□□ -1.42
UFD1P53044 MCH2YKL221W 1422 nt6.17□□□□□ -1.42
UFD1P53044 YGL081WYGL081W 963 nt6.17□□□□□ -1.42
UFD1P53044 CDC7YDL017W 1524 nt6.16□□□□□ -1.42
UFD1P53044 YMR074CYMR074C 438 nt6.16□□□□□ -1.42
UFD1P53044 GPA1YHR005C 1419 nt6.16□□□□□ -1.42
UFD1P53044 SUF3tG(CCC)D 72 nt6.15□□□□□ -1.42
UFD1P53044 BIM1YER016W 1035 nt6.15□□□□□ -1.42
UFD1P53044 MTR3YGR158C 753 nt6.15□□□□□ -1.42
UFD1P53044 RRN10YBL025W 438 nt6.15□□□□□ -1.42
UFD1P53044 SUN4YNL066W 1263 nt6.15□□□□□ -1.42
UFD1P53044 SDH8YBR269C 417 nt6.15□□□□□ -1.42
UFD1P53044 HXT2YMR011W 1626 nt6.14□□□□□ -1.43
UFD1P53044 CYB2YML054C 1776 nt6.14□□□□□ -1.43
UFD1P53044 YBR284WYBR284W 2394 nt6.14□□□□□ -1.43
UFD1P53044 ARC35YNR035C 1029 nt6.14□□□□□ -1.43
UFD1P53044 SNT309YPR101W 528 nt6.14□□□□□ -1.43
UFD1P53044 RGT2YDL138W 2292 nt6.14□□□□□ -1.43
UFD1P53044 PGI1YBR196C 1665 nt6.14□□□□□ -1.43
UFD1P53044 DOC1YGL240W 753 nt6.13□□□□□ -1.43
UFD1P53044 AIM3YBR108W 2844 nt6.12□□□□□ -1.43
UFD1P53044 ERG27YLR100W 1044 nt6.12□□□□□ -1.43
UFD1P53044 CIT2YCR005C 1383 nt6.11□□□□□ -1.43
UFD1P53044 PET117YER058W 324 nt6.11□□□□□ -1.43
UFD1P53044 PAM17YKR065C 594 nt6.11□□□□□ -1.43
UFD1P53044 PHO85YPL031C 918 nt6.11□□□□□ -1.43
UFD1P53044 HOG1YLR113W 1308 nt6.1□□□□□ -1.43
UFD1P53044 GTT3YEL017W 1014 nt6.1□□□□□ -1.43
UFD1P53044 NTG1YAL015C 1200 nt6.1□□□□□ -1.43
UFD1P53044 NME1NME1 340 nt6.1□□□□□ -1.43
UFD1P53044 YPR127WYPR127W 1038 nt6.1□□□□□ -1.43
UFD1P53044 SLX5YDL013W 1860 nt6.1□□□□□ -1.43
UFD1P53044 TAH11YJR046W 1815 nt6.1□□□□□ -1.43
UFD1P53044 AMN1YBR158W 1650 nt6.1□□□□□ -1.43
UFD1P53044 TDP1YBR223C 1635 nt6.1□□□□□ -1.43
UFD1P53044 FPR2YDR519W 408 nt6.09□□□□□ -1.43
UFD1P53044 PIH1YHR034C 1035 nt6.08□□□□□ -1.44
UFD1P53044 DPH5YLR172C 903 nt6.08□□□□□ -1.44
UFD1P53044 YML079WYML079W 606 nt6.08□□□□□ -1.44
UFD1P53044 YML122CYML122C 381 nt6.08□□□□□ -1.44
UFD1P53044 RPL43AYPR043W 279 nt6.08□□□□□ -1.44
UFD1P53044 DMC1YER179W 1005 nt6.07□□□□□ -1.44
UFD1P53044 RPL2BYIL018W 765 nt6.07□□□□□ -1.44
UFD1P53044 RTC4YNL254C 1206 nt6.07□□□□□ -1.44
UFD1P53044 ATP23YNR020C 813 nt6.07□□□□□ -1.44
UFD1P53044 DPM1YPR183W 804 nt6.07□□□□□ -1.44
UFD1P53044 BRN1YBL097W 2265 nt6.07□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms