Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HNM1YGL077C 1692 nt5.63□□□□□ -1.51
VPS55P47111 AFG3YER017C 2286 nt5.63□□□□□ -1.51
VPS55P47111 TCB1YOR086C 3561 nt5.63□□□□□ -1.51
VPS55P47111 PET117YER058W 324 nt5.63□□□□□ -1.51
VPS55P47111 YEL023CYEL023C 2049 nt5.62□□□□□ -1.51
VPS55P47111 YBL113CYBL113C 2379 nt5.62□□□□□ -1.51
VPS55P47111 AIM46YHR199C 933 nt5.62□□□□□ -1.51
VPS55P47111 RTC4YNL254C 1206 nt5.62□□□□□ -1.51
VPS55P47111 DCR2YLR361C 1737 nt5.62□□□□□ -1.51
VPS55P47111 SUF3tG(CCC)D 72 nt5.61□□□□□ -1.51
VPS55P47111 GNA1YFL017C 480 nt5.61□□□□□ -1.51
VPS55P47111 CMK2YOL016C 1344 nt5.61□□□□□ -1.51
VPS55P47111 AGP2YBR132C 1791 nt5.6□□□□□ -1.51
VPS55P47111 MPE1YKL059C 1326 nt5.6□□□□□ -1.51
VPS55P47111 AAD14YNL331C 1131 nt5.6□□□□□ -1.51
VPS55P47111 DPM1YPR183W 804 nt5.6□□□□□ -1.51
VPS55P47111 VTS1YOR359W 1572 nt5.59□□□□□ -1.51
VPS55P47111 NAF1YNL124W 1479 nt5.59□□□□□ -1.51
VPS55P47111 YGL260WYGL260W 231 nt5.59□□□□□ -1.51
VPS55P47111 YNR001W-AYNR001W-A 219 nt5.59□□□□□ -1.51
VPS55P47111 MCP1YOR228C 909 nt5.59□□□□□ -1.51
VPS55P47111 MAL31YBR298C 1845 nt5.59□□□□□ -1.51
VPS55P47111 GET4YOR164C 939 nt5.58□□□□□ -1.52
VPS55P47111 RFS1YBR052C 633 nt5.58□□□□□ -1.52
VPS55P47111 snR30snR30 606 nt5.58□□□□□ -1.52
VPS55P47111 HEL1YKR017C 1656 nt5.57□□□□□ -1.52
VPS55P47111 MCM5YLR274W 2328 nt5.57□□□□□ -1.52
VPS55P47111 GTS1YGL181W 1191 nt5.57□□□□□ -1.52
VPS55P47111 YKL147CYKL147C 618 nt5.57□□□□□ -1.52
VPS55P47111 YMR074CYMR074C 438 nt5.57□□□□□ -1.52
VPS55P47111 ZIM17YNL310C 525 nt5.57□□□□□ -1.52
VPS55P47111 RMD8YFR048W 1989 nt5.56□□□□□ -1.52
VPS55P47111 SRF1YDL133W 1314 nt5.56□□□□□ -1.52
VPS55P47111 MSS51YLR203C 1311 nt5.56□□□□□ -1.52
VPS55P47111 STF1YDL130W-A 261 nt5.56□□□□□ -1.52
VPS55P47111 PDA1YER178W 1263 nt5.56□□□□□ -1.52
VPS55P47111 YJL144WYJL144W 315 nt5.56□□□□□ -1.52
VPS55P47111 YLR162WYLR162W 357 nt5.56□□□□□ -1.52
VPS55P47111 YOR041CYOR041C 432 nt5.56□□□□□ -1.52
VPS55P47111 LGE1YPL055C 999 nt5.56□□□□□ -1.52
VPS55P47111 RPL43AYPR043W 279 nt5.56□□□□□ -1.52
VPS55P47111 YPR130CYPR130C 408 nt5.56□□□□□ -1.52
VPS55P47111 RDR1YOR380W 1641 nt5.56□□□□□ -1.52
VPS55P47111 MEU1YLR017W 1014 nt5.55□□□□□ -1.52
VPS55P47111 SML1YML058W 315 nt5.55□□□□□ -1.52
VPS55P47111 SPE3YPR069C 882 nt5.54□□□□□ -1.52
VPS55P47111 YCL049CYCL049C 939 nt5.54□□□□□ -1.52
VPS55P47111 TOS2YGR221C 1869 nt5.54□□□□□ -1.52
VPS55P47111 CDC7YDL017W 1524 nt5.53□□□□□ -1.52
VPS55P47111 MHP1YJL042W 4197 nt5.53□□□□□ -1.52
VPS55P47111 ERG12YMR208W 1332 nt5.53□□□□□ -1.52
VPS55P47111 PLB2YMR006C 2121 nt5.53□□□□□ -1.52
VPS55P47111 HTZ1YOL012C 405 nt5.53□□□□□ -1.52
VPS55P47111 LIP5YOR196C 1245 nt5.53□□□□□ -1.52
VPS55P47111 CDC23YHR166C 1881 nt5.53□□□□□ -1.52
VPS55P47111 CIA1YDR267C 993 nt5.52□□□□□ -1.53
VPS55P47111 ECM30YLR436C 3825 nt5.52□□□□□ -1.53
VPS55P47111 ERG10YPL028W 1197 nt5.52□□□□□ -1.53
VPS55P47111 DMC1YER179W 1005 nt5.51□□□□□ -1.53
VPS55P47111 ERG27YLR100W 1044 nt5.51□□□□□ -1.53
VPS55P47111 PUS4YNL292W 1212 nt5.51□□□□□ -1.53
VPS55P47111 PLB3YOL011W 2061 nt5.51□□□□□ -1.53
VPS55P47111 PGI1YBR196C 1665 nt5.5□□□□□ -1.53
VPS55P47111 HSM3YBR272C 1443 nt5.5□□□□□ -1.53
VPS55P47111 APE4YHR113W 1473 nt5.5□□□□□ -1.53
VPS55P47111 SKY1YMR216C 2229 nt5.5□□□□□ -1.53
VPS55P47111 RQC1YDR333C 2172 nt5.49□□□□□ -1.53
VPS55P47111 BRN1YBL097W 2265 nt5.49□□□□□ -1.53
VPS55P47111 SEC23YPR181C 2307 nt5.49□□□□□ -1.53
VPS55P47111 YJL163CYJL163C 1668 nt5.49□□□□□ -1.53
VPS55P47111 CAN1YEL063C 1773 nt5.48□□□□□ -1.53
VPS55P47111 YNR005CYNR005C 405 nt5.48□□□□□ -1.53
VPS55P47111 RSP5YER125W 2430 nt5.48□□□□□ -1.53
VPS55P47111 COX15YER141W 1461 nt5.47□□□□□ -1.53
VPS55P47111 YJL045WYJL045W 1905 nt5.47□□□□□ -1.53
VPS55P47111 MPH3YJR160C 1809 nt5.47□□□□□ -1.53
VPS55P47111 SUN4YNL066W 1263 nt5.47□□□□□ -1.53
VPS55P47111 YOL046CYOL046C 675 nt5.47□□□□□ -1.53
VPS55P47111 FIT2YOR382W 462 nt5.47□□□□□ -1.53
VPS55P47111 YPR076WYPR076W 375 nt5.47□□□□□ -1.53
VPS55P47111 BIO3YNR058W 1443 nt5.47□□□□□ -1.53
VPS55P47111 EFM1YHL039W 1758 nt5.47□□□□□ -1.53
VPS55P47111 LDB7YBL006C 543 nt5.46□□□□□ -1.54
VPS55P47111 FLC2YAL053W 2352 nt5.46□□□□□ -1.54
VPS55P47111 EMP65YER140W 1671 nt5.46□□□□□ -1.54
VPS55P47111 KIN1YDR122W 3195 nt5.45□□□□□ -1.54
VPS55P47111 MAS1YLR163C 1389 nt5.45□□□□□ -1.54
VPS55P47111 NTG2YOL043C 1143 nt5.45□□□□□ -1.54
VPS55P47111 YOL099CYOL099C 492 nt5.45□□□□□ -1.54
VPS55P47111 YOR111WYOR111W 699 nt5.45□□□□□ -1.54
VPS55P47111 YPR127WYPR127W 1038 nt5.45□□□□□ -1.54
VPS55P47111 ENB1YOL158C 1821 nt5.45□□□□□ -1.54
VPS55P47111 YCR049CYCR049C 447 nt5.44□□□□□ -1.54
VPS55P47111 THR1YHR025W 1074 nt5.44□□□□□ -1.54
VPS55P47111 YAL045CYAL045C 309 nt5.44□□□□□ -1.54
VPS55P47111 PHO85YPL031C 918 nt5.44□□□□□ -1.54
VPS55P47111 NUP57YGR119C 1626 nt5.44□□□□□ -1.54
VPS55P47111 SMC5YOL034W 3282 nt5.43□□□□□ -1.54
VPS55P47111 PPH21YDL134C 1110 nt5.43□□□□□ -1.54
VPS55P47111 HHY1YEL059W 309 nt5.43□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 50.5 ms