Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 INP54YOL065C 1155 nt5.88□□□□□ -1.47
CDC40P40968 IPL1YPL209C 1104 nt5.88□□□□□ -1.47
CDC40P40968 HXT17YNR072W 1695 nt5.88□□□□□ -1.47
CDC40P40968 IME2YJL106W 1938 nt5.87□□□□□ -1.47
CDC40P40968 MSN2YMR037C 2115 nt5.87□□□□□ -1.47
CDC40P40968 YCP4YCR004C 744 nt5.87□□□□□ -1.47
CDC40P40968 DST1YGL043W 930 nt5.87□□□□□ -1.47
CDC40P40968 FLX1YIL134W 936 nt5.87□□□□□ -1.47
CDC40P40968 CYC3YAL039C 810 nt5.87□□□□□ -1.47
CDC40P40968 CAR2YLR438W 1275 nt5.87□□□□□ -1.47
CDC40P40968 VMA2YBR127C 1554 nt5.86□□□□□ -1.47
CDC40P40968 SHC1YER096W 1539 nt5.86□□□□□ -1.47
CDC40P40968 FPR2YDR519W 408 nt5.86□□□□□ -1.47
CDC40P40968 YTH1YPR107C 627 nt5.86□□□□□ -1.47
CDC40P40968 YLL066CYLL066C 3618 nt5.85□□□□□ -1.47
CDC40P40968 LDB19YOR322C 2457 nt5.85□□□□□ -1.47
CDC40P40968 CHS7YHR142W 951 nt5.85□□□□□ -1.47
CDC40P40968 OLA1YBR025C 1185 nt5.85□□□□□ -1.47
CDC40P40968 GPH1YPR160W 2709 nt5.85□□□□□ -1.47
CDC40P40968 GSH1YJL101C 2037 nt5.84□□□□□ -1.47
CDC40P40968 ECM38YLR299W 1983 nt5.84□□□□□ -1.47
CDC40P40968 YDR215CYDR215C 414 nt5.84□□□□□ -1.47
CDC40P40968 YDR327WYDR327W 327 nt5.84□□□□□ -1.47
CDC40P40968 PUP3YER094C 618 nt5.84□□□□□ -1.47
CDC40P40968 YHR033WYHR033W 1272 nt5.84□□□□□ -1.47
CDC40P40968 SRP102YKL154W 735 nt5.84□□□□□ -1.47
CDC40P40968 YLR280CYLR280C 351 nt5.84□□□□□ -1.47
CDC40P40968 MCH2YKL221W 1422 nt5.83□□□□□ -1.48
CDC40P40968 GLN3YER040W 2193 nt5.83□□□□□ -1.48
CDC40P40968 CTF8YHR191C 402 nt5.83□□□□□ -1.48
CDC40P40968 RPL2BYIL018W 765 nt5.83□□□□□ -1.48
CDC40P40968 ARC35YNR035C 1029 nt5.83□□□□□ -1.48
CDC40P40968 MET22YOL064C 1074 nt5.83□□□□□ -1.48
CDC40P40968 YAH1YPL252C 519 nt5.83□□□□□ -1.48
CDC40P40968 DEF1YKL054C 2217 nt5.83□□□□□ -1.48
CDC40P40968 KNS1YLL019C 2214 nt5.82□□□□□ -1.48
CDC40P40968 YCR025CYCR025C 411 nt5.82□□□□□ -1.48
CDC40P40968 RHO1YPR165W 630 nt5.82□□□□□ -1.48
CDC40P40968 MSS1YMR023C 1581 nt5.81□□□□□ -1.48
CDC40P40968 THI73YLR004C 1572 nt5.8□□□□□ -1.48
CDC40P40968 KDX1YKL161C 1302 nt5.8□□□□□ -1.48
CDC40P40968 BDF2YDL070W 1917 nt5.8□□□□□ -1.48
CDC40P40968 TRP5YGL026C 2124 nt5.8□□□□□ -1.48
CDC40P40968 ERO1YML130C 1692 nt5.8□□□□□ -1.48
CDC40P40968 GTT3YEL017W 1014 nt5.8□□□□□ -1.48
CDC40P40968 MTR3YGR158C 753 nt5.8□□□□□ -1.48
CDC40P40968 YIA6YIL006W 1122 nt5.8□□□□□ -1.48
CDC40P40968 MNN9YPL050C 1188 nt5.8□□□□□ -1.48
CDC40P40968 OPI11YPR044C 354 nt5.8□□□□□ -1.48
CDC40P40968 TKL2YBR117C 2046 nt5.8□□□□□ -1.48
CDC40P40968 BXI1YNL305C 894 nt5.79□□□□□ -1.48
CDC40P40968 YPC1YBR183W 951 nt5.79□□□□□ -1.48
CDC40P40968 HIS7YBR248C 1659 nt5.79□□□□□ -1.48
CDC40P40968 TPK1YJL164C 1194 nt5.78□□□□□ -1.48
CDC40P40968 YAL045CYAL045C 309 nt5.78□□□□□ -1.48
CDC40P40968 SLG1YOR008C 1137 nt5.78□□□□□ -1.48
CDC40P40968 RCR1YBR005W 642 nt5.78□□□□□ -1.48
CDC40P40968 OST3YOR085W 1053 nt5.78□□□□□ -1.48
CDC40P40968 SNT309YPR101W 528 nt5.78□□□□□ -1.48
CDC40P40968 HTS1YPR033C 1641 nt5.77□□□□□ -1.48
CDC40P40968 YBR241CYBR241C 1467 nt5.77□□□□□ -1.49
CDC40P40968 OCH1YGL038C 1443 nt5.77□□□□□ -1.49
CDC40P40968 TAH11YJR046W 1815 nt5.77□□□□□ -1.49
CDC40P40968 ERS1YCR075C 783 nt5.77□□□□□ -1.49
CDC40P40968 HSP12YFL014W 330 nt5.77□□□□□ -1.49
CDC40P40968 YMR007WYMR007W 381 nt5.77□□□□□ -1.49
CDC40P40968 ARP3YJR065C 1350 nt5.77□□□□□ -1.49
CDC40P40968 CCT3YJL014W 1605 nt5.77□□□□□ -1.49
CDC40P40968 AVO1YOL078W 3531 nt5.77□□□□□ -1.49
CDC40P40968 BRN1YBL097W 2265 nt5.76□□□□□ -1.49
CDC40P40968 SWM1YDR260C 513 nt5.76□□□□□ -1.49
CDC40P40968 SER2YGR208W 930 nt5.76□□□□□ -1.49
CDC40P40968 PUS5YLR165C 765 nt5.76□□□□□ -1.49
CDC40P40968 RIB1YBL033C 1038 nt5.76□□□□□ -1.49
CDC40P40968 YMR166CYMR166C 1107 nt5.76□□□□□ -1.49
CDC40P40968 YNL165WYNL165W 1221 nt5.76□□□□□ -1.49
CDC40P40968 TFB4YPR056W 1017 nt5.76□□□□□ -1.49
CDC40P40968 NOG2YNR053C 1461 nt5.76□□□□□ -1.49
CDC40P40968 CAK1YFL029C 1107 nt5.75□□□□□ -1.49
CDC40P40968 YGR210CYGR210C 1236 nt5.75□□□□□ -1.49
CDC40P40968 YBR284WYBR284W 2394 nt5.75□□□□□ -1.49
CDC40P40968 AVT4YNL101W 2142 nt5.75□□□□□ -1.49
CDC40P40968 ASN1YPR145W 1719 nt5.74□□□□□ -1.49
CDC40P40968 YDL023CYDL023C 321 nt5.74□□□□□ -1.49
CDC40P40968 PET494YNR045W 1470 nt5.74□□□□□ -1.49
CDC40P40968 FCY22YER060W-A 1593 nt5.74□□□□□ -1.49
CDC40P40968 PHO3YBR092C 1404 nt5.74□□□□□ -1.49
CDC40P40968 RRT14YIL127C 621 nt5.73□□□□□ -1.49
CDC40P40968 DAL80YKR034W 810 nt5.73□□□□□ -1.49
CDC40P40968 SUR7YML052W 909 nt5.73□□□□□ -1.49
CDC40P40968 YNL200CYNL200C 741 nt5.73□□□□□ -1.49
CDC40P40968 AMN1YBR158W 1650 nt5.72□□□□□ -1.49
CDC40P40968 FHN1YGR131W 525 nt5.72□□□□□ -1.49
CDC40P40968 YMR027WYMR027W 1413 nt5.72□□□□□ -1.49
CDC40P40968 ARG7YMR062C 1326 nt5.72□□□□□ -1.49
CDC40P40968 ERG24YNL280C 1317 nt5.72□□□□□ -1.49
CDC40P40968 CYC8YBR112C 2901 nt5.71□□□□□ -1.49
CDC40P40968 YPT31YER031C 672 nt5.71□□□□□ -1.5
CDC40P40968 OPI8YKR035C 642 nt5.71□□□□□ -1.5
CDC40P40968 LSP1YPL004C 1026 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms