Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
PCK1P35558 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.12■■□□□ 1.77
PCK1P35558 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCK1P35558 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.11■■□□□ 1.77
PCK1P35558 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
PCK1P35558 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCK1P35558 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCK1P35558 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.1■■□□□ 1.77
PCK1P35558 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCK1P35558 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCK1P35558 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCK1P35558 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCK1P35558 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.09■■□□□ 1.77
PCK1P35558 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.09■■□□□ 1.77
PCK1P35558 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.09■■□□□ 1.77
PCK1P35558 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.09■■□□□ 1.77
PCK1P35558 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCK1P35558 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PCK1P35558 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCK1P35558 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PCK1P35558 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
PCK1P35558 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.06■■□□□ 1.76
PCK1P35558 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PCK1P35558 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.06■■□□□ 1.76
PCK1P35558 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCK1P35558 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.05■■□□□ 1.76
PCK1P35558 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
PCK1P35558 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.05■■□□□ 1.76
PCK1P35558 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.05■■□□□ 1.76
PCK1P35558 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCK1P35558 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.05■■□□□ 1.76
PCK1P35558 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCK1P35558 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCK1P35558 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCK1P35558 AC008813.1-201ENST00000536597 885 ntBASIC26.04■■□□□ 1.76
PCK1P35558 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCK1P35558 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.03■■□□□ 1.76
PCK1P35558 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCK1P35558 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.02■■□□□ 1.76
PCK1P35558 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCK1P35558 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCK1P35558 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCK1P35558 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.02■■□□□ 1.76
PCK1P35558 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.02■■□□□ 1.76
PCK1P35558 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
PCK1P35558 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCK1P35558 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PCK1P35558 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCK1P35558 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCK1P35558 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.01■■□□□ 1.75
PCK1P35558 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.01■■□□□ 1.75
PCK1P35558 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.01■■□□□ 1.75
PCK1P35558 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCK1P35558 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCK1P35558 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCK1P35558 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCK1P35558 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCK1P35558 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.98■■□□□ 1.75
PCK1P35558 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCK1P35558 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCK1P35558 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PCK1P35558 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCK1P35558 AL449106.1-201ENST00000608517 1980 ntBASIC25.97■■□□□ 1.75
PCK1P35558 CR559946.2-201ENST00000623684 991 ntBASIC25.97■■□□□ 1.75
PCK1P35558 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCK1P35558 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCK1P35558 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCK1P35558 AC148477.6-201ENST00000623746 465 ntBASIC25.96■■□□□ 1.75
PCK1P35558 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.96■■□□□ 1.75
PCK1P35558 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCK1P35558 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCK1P35558 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCK1P35558 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.95■■□□□ 1.74
PCK1P35558 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.95■■□□□ 1.74
PCK1P35558 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.95■■□□□ 1.74
PCK1P35558 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCK1P35558 WHAMMP3-201ENST00000611636 1609 ntBASIC25.95■■□□□ 1.74
PCK1P35558 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCK1P35558 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCK1P35558 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PCK1P35558 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCK1P35558 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
PCK1P35558 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.93■■□□□ 1.74
PCK1P35558 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCK1P35558 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PCK1P35558 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 554.7 ms