Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HTR1EP28566 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR1EP28566 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR1EP28566 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR1EP28566 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HTR1EP28566 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.8■■□□□ 1.4
HTR1EP28566 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HTR1EP28566 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.79■■□□□ 1.4
HTR1EP28566 AC018358.1-201ENST00000631079 1402 ntBASIC23.79■■□□□ 1.4
HTR1EP28566 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HTR1EP28566 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
HTR1EP28566 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
HTR1EP28566 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.78■■□□□ 1.4
HTR1EP28566 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.78■■□□□ 1.4
HTR1EP28566 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.78■■□□□ 1.4
HTR1EP28566 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR1EP28566 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HTR1EP28566 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.78■■□□□ 1.4
HTR1EP28566 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.78■■□□□ 1.4
HTR1EP28566 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.78■■□□□ 1.4
HTR1EP28566 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR1EP28566 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR1EP28566 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.77■■□□□ 1.4
HTR1EP28566 AC108673.1-201ENST00000510422 1159 ntBASIC23.77■■□□□ 1.4
HTR1EP28566 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.77■■□□□ 1.4
HTR1EP28566 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.77■■□□□ 1.4
HTR1EP28566 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HTR1EP28566 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.77■■□□□ 1.4
HTR1EP28566 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
HTR1EP28566 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.75■■□□□ 1.39
HTR1EP28566 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HTR1EP28566 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.75■■□□□ 1.39
HTR1EP28566 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.74■■□□□ 1.39
HTR1EP28566 AC145676.1-201ENST00000514988 2004 ntBASIC23.74■■□□□ 1.39
HTR1EP28566 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HTR1EP28566 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.74■■□□□ 1.39
HTR1EP28566 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.74■■□□□ 1.39
HTR1EP28566 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR1EP28566 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.74■■□□□ 1.39
HTR1EP28566 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
HTR1EP28566 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR1EP28566 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR1EP28566 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
HTR1EP28566 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR1EP28566 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.73■■□□□ 1.39
HTR1EP28566 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTR1EP28566 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.72■■□□□ 1.39
HTR1EP28566 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.72■■□□□ 1.39
HTR1EP28566 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
HTR1EP28566 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.72■■□□□ 1.39
HTR1EP28566 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
HTR1EP28566 DUX4L11-201ENST00000611504 1267 ntBASIC23.71■■□□□ 1.39
HTR1EP28566 DUX4L12-201ENST00000614593 1267 ntBASIC23.71■■□□□ 1.39
HTR1EP28566 DUX4L14-201ENST00000621227 1267 ntBASIC23.71■■□□□ 1.39
HTR1EP28566 MIR6090-201ENST00000622481 60 ntBASIC23.71■■□□□ 1.39
HTR1EP28566 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HTR1EP28566 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HTR1EP28566 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HTR1EP28566 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HTR1EP28566 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
HTR1EP28566 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.69■■□□□ 1.38
HTR1EP28566 LINC01971-201ENST00000617888 1048 ntBASIC23.69■■□□□ 1.38
HTR1EP28566 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTR1EP28566 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.68■■□□□ 1.38
HTR1EP28566 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTR1EP28566 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
HTR1EP28566 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.68■■□□□ 1.38
HTR1EP28566 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HTR1EP28566 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR1EP28566 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
HTR1EP28566 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.67■■□□□ 1.38
HTR1EP28566 CR559946.2-201ENST00000623684 991 ntBASIC23.67■■□□□ 1.38
HTR1EP28566 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.67■■□□□ 1.38
HTR1EP28566 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.66■■□□□ 1.38
HTR1EP28566 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HTR1EP28566 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HTR1EP28566 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
HTR1EP28566 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
HTR1EP28566 AC020928.2-201ENST00000588717 2197 ntBASIC23.65■■□□□ 1.38
HTR1EP28566 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HTR1EP28566 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HTR1EP28566 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.65■■□□□ 1.38
HTR1EP28566 AC135983.2-203ENST00000454486 1613 ntBASIC23.65■■□□□ 1.38
HTR1EP28566 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.64■■□□□ 1.38
HTR1EP28566 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HTR1EP28566 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HTR1EP28566 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
HTR1EP28566 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.64■■□□□ 1.37
HTR1EP28566 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HTR1EP28566 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HTR1EP28566 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR1EP28566 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
HTR1EP28566 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR1EP28566 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.63■■□□□ 1.37
HTR1EP28566 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR1EP28566 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HTR1EP28566 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HTR1EP28566 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.62■■□□□ 1.37
HTR1EP28566 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HTR1EP28566 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms