Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
GDF1P27539 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
GDF1P27539 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.72■■□□□ 1.23
GDF1P27539 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
GDF1P27539 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.72■■□□□ 1.23
GDF1P27539 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
GDF1P27539 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.72■■□□□ 1.23
GDF1P27539 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
GDF1P27539 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
GDF1P27539 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
GDF1P27539 AC018358.1-201ENST00000631079 1402 ntBASIC22.71■■□□□ 1.23
GDF1P27539 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
GDF1P27539 DRD5P2-201ENST00000421395 2012 ntBASIC22.7■■□□□ 1.22
GDF1P27539 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
GDF1P27539 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
GDF1P27539 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.69■■□□□ 1.22
GDF1P27539 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.69■■□□□ 1.22
GDF1P27539 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
GDF1P27539 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
GDF1P27539 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
GDF1P27539 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
GDF1P27539 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
GDF1P27539 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
GDF1P27539 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
GDF1P27539 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GDF1P27539 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GDF1P27539 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.68■■□□□ 1.22
GDF1P27539 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
GDF1P27539 AL359258.2-201ENST00000564063 1566 ntBASIC22.67■■□□□ 1.22
GDF1P27539 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
GDF1P27539 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GDF1P27539 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GDF1P27539 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GDF1P27539 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
GDF1P27539 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.67■■□□□ 1.22
GDF1P27539 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
GDF1P27539 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
GDF1P27539 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.66■■□□□ 1.22
GDF1P27539 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
GDF1P27539 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
GDF1P27539 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
GDF1P27539 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.65■■□□□ 1.22
GDF1P27539 ABHD17AP5-201ENST00000580133 923 ntBASIC22.65■■□□□ 1.22
GDF1P27539 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
GDF1P27539 AC092296.2-201ENST00000589470 999 ntBASIC22.64■■□□□ 1.21
GDF1P27539 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
GDF1P27539 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GDF1P27539 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.63■■□□□ 1.21
GDF1P27539 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
GDF1P27539 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.63■■□□□ 1.21
GDF1P27539 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GDF1P27539 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GDF1P27539 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
GDF1P27539 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GDF1P27539 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GDF1P27539 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
GDF1P27539 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.61■■□□□ 1.21
GDF1P27539 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GDF1P27539 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GDF1P27539 ECEL1P2-201ENST00000461596 1295 ntBASIC22.6■■□□□ 1.21
GDF1P27539 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.6■■□□□ 1.21
GDF1P27539 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.59■■□□□ 1.21
GDF1P27539 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDF1P27539 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.59■■□□□ 1.21
GDF1P27539 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.58■■□□□ 1.21
GDF1P27539 AL157400.5-201ENST00000507624 621 ntBASIC22.58■■□□□ 1.21
GDF1P27539 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.58■■□□□ 1.21
GDF1P27539 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
GDF1P27539 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
GDF1P27539 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GDF1P27539 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.57■■□□□ 1.2
GDF1P27539 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.56■■□□□ 1.2
GDF1P27539 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.56■■□□□ 1.2
GDF1P27539 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDF1P27539 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
GDF1P27539 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
GDF1P27539 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
GDF1P27539 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.55■■□□□ 1.2
GDF1P27539 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GDF1P27539 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GDF1P27539 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GDF1P27539 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GDF1P27539 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
GDF1P27539 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GDF1P27539 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
GDF1P27539 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
GDF1P27539 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
GDF1P27539 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.53■■□□□ 1.2
GDF1P27539 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.53■■□□□ 1.2
GDF1P27539 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
GDF1P27539 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
GDF1P27539 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GDF1P27539 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.52■■□□□ 1.2
GDF1P27539 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GDF1P27539 WHAMMP3-201ENST00000611636 1609 ntBASIC22.51■■□□□ 1.19
GDF1P27539 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GDF1P27539 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.51■■□□□ 1.19
GDF1P27539 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
GDF1P27539 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GDF1P27539 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms