Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 TIP41YPR040W 1071 nt8.43□□□□□ -1.06
TY1A-LR1P0CX68 PPT1YGR123C 1542 nt8.43□□□□□ -1.06
TY1A-LR1P0CX68 MIF2YKL089W 1650 nt8.43□□□□□ -1.06
TY1A-LR1P0CX68 DCV1YFR012W 609 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 YIR017W-AYIR017W-A 600 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 YJL067WYJL067W 351 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 YUR1YJL139C 1287 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 DRE2YKR071C 1047 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 PSR2YLR019W 1194 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 REH1YLR387C 1299 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 BSC4YNL269W 396 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 GOR1YNL274C 1053 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 RPN5YDL147W 1338 nt8.42□□□□□ -1.06
TY1A-LR1P0CX68 UGP1YKL035W 1500 nt8.41□□□□□ -1.06
TY1A-LR1P0CX68 KCH1YJR054W 1494 nt8.41□□□□□ -1.06
TY1A-LR1P0CX68 SDS3YIL084C 984 nt8.41□□□□□ -1.06
TY1A-LR1P0CX68 IPP1YBR011C 864 nt8.41□□□□□ -1.06
TY1A-LR1P0CX68 TED1YIL039W 1422 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 NHP10YDL002C 612 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 USB1YLR132C 873 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 YLR456WYLR456W 615 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 INP54YOL065C 1155 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 SMK1YPR054W 1167 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 YSA1YBR111C 696 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 CNS1YBR155W 1158 nt8.4□□□□□ -1.06
TY1A-LR1P0CX68 MMR1YLR190W 1476 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 HSE1YHL002W 1359 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 RTT103YDR289C 1230 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 SCL1YGL011C 759 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 YNG2YHR090C 849 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 PRI1YIR008C 1230 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 VPS75YNL246W 795 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 YOR105WYOR105W 327 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 YOR139CYOR139C 393 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 DAP1YPL170W 459 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 HAL1YPR005C 885 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 SCD6YPR129W 1050 nt8.39□□□□□ -1.07
TY1A-LR1P0CX68 YDL027CYDL027C 1263 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 YGR026WYGR026W 837 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 YLL017WYLL017W 312 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 YLR162WYLR162W 357 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 YNL024CYNL024C 741 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 YHL008CYHL008C 1884 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 ZRT3YKL175W 1512 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 ILV3YJR016C 1758 nt8.38□□□□□ -1.07
TY1A-LR1P0CX68 URA8YJR103W 1737 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 TFC7YOR110W 1308 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 MNN10YDR245W 1182 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 YGL185CYGL185C 1140 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 YLF2YHL014C 1218 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 INP1YMR204C 1263 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 SMA1YPL027W 738 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 USV1YPL230W 1176 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 ADE17YMR120C 1779 nt8.37□□□□□ -1.07
TY1A-LR1P0CX68 YLR345WYLR345W 1530 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 PET18YCR020C 648 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 ATC1YDR184C 885 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 NUC1YJL208C 990 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 HAM1YJR069C 594 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 YMR245WYMR245W 621 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 PHO23YNL097C 993 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 ARG8YOL140W 1272 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 YEF1YEL041W 1488 nt8.36□□□□□ -1.07
TY1A-LR1P0CX68 PRE1YER012W 597 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 RSM26YJR101W 801 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 SEC72YLR292C 582 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 SPO20YMR017W 1194 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 PRP46YPL151C 1356 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 KTR4YBR199W 1395 nt8.35□□□□□ -1.07
TY1A-LR1P0CX68 IMG2YCR071C 441 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 IPI1YHR085W 1005 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 ELF1YKL160W 438 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 YMR178WYMR178W 825 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 REX4YOL080C 870 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 SFG1YOR315W 1041 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 SNF8YPL002C 702 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 UTR1YJR049C 1593 nt8.34□□□□□ -1.07
TY1A-LR1P0CX68 ARH1YDR376W 1482 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 YHB1YGR234W 1200 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 PAN5YHR063C 1140 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 AHT1YHR093W 549 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 GTT1YIR038C 705 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 POL32YJR043C 1053 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 MGM101YJR144W 810 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 AAH1YNL141W 1044 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 RCL1YOL010W 1104 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 COQ8YGL119W 1506 nt8.33□□□□□ -1.08
TY1A-LR1P0CX68 HST4YDR191W 1113 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 CBS2YDR197W 1170 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 CAB1YDR531W 1104 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 GIM4YEL003W 336 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 NBP35YGL091C 987 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 SRP21YKL122C 504 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 YLR179CYLR179C 606 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 TIM23YNR017W 669 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 SME1YOR159C 285 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 YPR142CYPR142C 564 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 TEC1YBR083W 1461 nt8.32□□□□□ -1.08
TY1A-LR1P0CX68 TRS23YDR246W 660 nt8.31□□□□□ -1.08
TY1A-LR1P0CX68 RRT5YFR032C 870 nt8.31□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms