Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.64■■■□□ 2.18
HOXC6P09630 AC026202.3-201ENST00000600805 1127 ntBASIC28.64■■■□□ 2.18
HOXC6P09630 AL359258.2-201ENST00000564063 1566 ntBASIC28.63■■■□□ 2.17
HOXC6P09630 AC025884.2-201ENST00000553429 711 ntBASIC28.63■■■□□ 2.17
HOXC6P09630 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
HOXC6P09630 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
HOXC6P09630 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
HOXC6P09630 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.62■■■□□ 2.17
HOXC6P09630 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HOXC6P09630 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.61■■■□□ 2.17
HOXC6P09630 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HOXC6P09630 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
HOXC6P09630 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HOXC6P09630 ST7-AS1-201ENST00000456775 1889 ntBASIC28.6■■■□□ 2.17
HOXC6P09630 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
HOXC6P09630 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.6■■■□□ 2.17
HOXC6P09630 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
HOXC6P09630 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HOXC6P09630 AC100797.4-201ENST00000631653 1827 ntBASIC28.59■■■□□ 2.17
HOXC6P09630 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HOXC6P09630 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
HOXC6P09630 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
HOXC6P09630 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.57■■■□□ 2.16
HOXC6P09630 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HOXC6P09630 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
HOXC6P09630 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.57■■■□□ 2.16
HOXC6P09630 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.57■■■□□ 2.16
HOXC6P09630 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
HOXC6P09630 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.56■■■□□ 2.16
HOXC6P09630 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.56■■■□□ 2.16
HOXC6P09630 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
HOXC6P09630 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
HOXC6P09630 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
HOXC6P09630 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.55■■■□□ 2.16
HOXC6P09630 AL035685.1-201ENST00000636663 812 ntBASIC28.55■■■□□ 2.16
HOXC6P09630 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.55■■■□□ 2.16
HOXC6P09630 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.54■■■□□ 2.16
HOXC6P09630 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
HOXC6P09630 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.54■■■□□ 2.16
HOXC6P09630 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
HOXC6P09630 RP9P-202ENST00000450133 1212 ntBASIC28.54■■■□□ 2.16
HOXC6P09630 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
HOXC6P09630 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.53■■■□□ 2.16
HOXC6P09630 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.53■■■□□ 2.16
HOXC6P09630 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
HOXC6P09630 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HOXC6P09630 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.52■■■□□ 2.16
HOXC6P09630 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
HOXC6P09630 AL451085.2-201ENST00000605085 799 ntBASIC28.52■■■□□ 2.16
HOXC6P09630 RAP2CP1-202ENST00000605179 643 ntBASIC28.52■■■□□ 2.16
HOXC6P09630 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HOXC6P09630 DUX4L9-201ENST00000449051 1259 ntBASIC28.51■■■□□ 2.15
HOXC6P09630 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.51■■■□□ 2.15
HOXC6P09630 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.5■■■□□ 2.15
HOXC6P09630 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HOXC6P09630 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
HOXC6P09630 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.49■■■□□ 2.15
HOXC6P09630 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HOXC6P09630 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.48■■■□□ 2.15
HOXC6P09630 AC093536.1-201ENST00000569153 554 ntBASIC28.48■■■□□ 2.15
HOXC6P09630 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HOXC6P09630 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
HOXC6P09630 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
HOXC6P09630 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.47■■■□□ 2.15
HOXC6P09630 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.47■■■□□ 2.15
HOXC6P09630 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HOXC6P09630 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.46■■■□□ 2.15
HOXC6P09630 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
HOXC6P09630 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
HOXC6P09630 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
HOXC6P09630 AC074183.2-201ENST00000623112 922 ntBASIC28.46■■■□□ 2.15
HOXC6P09630 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
HOXC6P09630 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
HOXC6P09630 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
HOXC6P09630 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.45■■■□□ 2.14
HOXC6P09630 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.14
HOXC6P09630 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
HOXC6P09630 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.44■■■□□ 2.14
HOXC6P09630 SPCS2P3-201ENST00000500401 656 ntBASIC28.44■■■□□ 2.14
HOXC6P09630 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.44■■■□□ 2.14
HOXC6P09630 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
HOXC6P09630 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
HOXC6P09630 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HOXC6P09630 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
HOXC6P09630 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
HOXC6P09630 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
HOXC6P09630 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
HOXC6P09630 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
HOXC6P09630 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.41■■■□□ 2.14
HOXC6P09630 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.41■■■□□ 2.14
HOXC6P09630 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.41■■■□□ 2.14
HOXC6P09630 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.41■■■□□ 2.14
HOXC6P09630 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.41■■■□□ 2.14
HOXC6P09630 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
HOXC6P09630 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
HOXC6P09630 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HOXC6P09630 MIR3960-201ENST00000583311 91 ntBASIC28.39■■■□□ 2.14
HOXC6P09630 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HOXC6P09630 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.38■■■□□ 2.13
HOXC6P09630 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms