Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.97■■□□□ 1.27
THBS1P07996 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
THBS1P07996 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
THBS1P07996 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
THBS1P07996 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
THBS1P07996 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
THBS1P07996 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.95■■□□□ 1.26
THBS1P07996 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.95■■□□□ 1.26
THBS1P07996 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.95■■□□□ 1.26
THBS1P07996 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
THBS1P07996 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
THBS1P07996 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
THBS1P07996 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.94■■□□□ 1.26
THBS1P07996 AL449106.1-201ENST00000608517 1980 ntBASIC22.94■■□□□ 1.26
THBS1P07996 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.94■■□□□ 1.26
THBS1P07996 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.94■■□□□ 1.26
THBS1P07996 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
THBS1P07996 ZNRF2P2-203ENST00000454624 420 ntBASIC22.93■■□□□ 1.26
THBS1P07996 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.93■■□□□ 1.26
THBS1P07996 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
THBS1P07996 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
THBS1P07996 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
THBS1P07996 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
THBS1P07996 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
THBS1P07996 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
THBS1P07996 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L13-201ENST00000554103 1267 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L15-201ENST00000611059 1267 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L23-201ENST00000615195 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L24-201ENST00000617576 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L22-201ENST00000618238 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L20-201ENST00000619712 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L21-201ENST00000622058 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L10-201ENST00000622460 1267 ntBASIC22.92■■□□□ 1.26
THBS1P07996 DUX4L25-201ENST00000624915 1269 ntBASIC22.92■■□□□ 1.26
THBS1P07996 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
THBS1P07996 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
THBS1P07996 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
THBS1P07996 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.91■■□□□ 1.26
THBS1P07996 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
THBS1P07996 WHAMMP3-201ENST00000611636 1609 ntBASIC22.9■■□□□ 1.26
THBS1P07996 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
THBS1P07996 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
THBS1P07996 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
THBS1P07996 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.89■■□□□ 1.25
THBS1P07996 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.88■■□□□ 1.25
THBS1P07996 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
THBS1P07996 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
THBS1P07996 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
THBS1P07996 DUX4L11-201ENST00000611504 1267 ntBASIC22.87■■□□□ 1.25
THBS1P07996 DUX4L12-201ENST00000614593 1267 ntBASIC22.87■■□□□ 1.25
THBS1P07996 DUX4L14-201ENST00000621227 1267 ntBASIC22.87■■□□□ 1.25
THBS1P07996 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
THBS1P07996 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
THBS1P07996 AP004609.3-201ENST00000610705 1884 ntBASIC22.86■■□□□ 1.25
THBS1P07996 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
THBS1P07996 AC008813.1-201ENST00000536597 885 ntBASIC22.86■■□□□ 1.25
THBS1P07996 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.86■■□□□ 1.25
THBS1P07996 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.86■■□□□ 1.25
THBS1P07996 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
THBS1P07996 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.86■■□□□ 1.25
THBS1P07996 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
THBS1P07996 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
THBS1P07996 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
THBS1P07996 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
THBS1P07996 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
THBS1P07996 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.85■■□□□ 1.25
THBS1P07996 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
THBS1P07996 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.84■■□□□ 1.25
THBS1P07996 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
THBS1P07996 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.84■■□□□ 1.25
THBS1P07996 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.83■■□□□ 1.25
THBS1P07996 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.83■■□□□ 1.25
THBS1P07996 HLA-V-202ENST00000446817 847 ntBASIC22.83■■□□□ 1.25
THBS1P07996 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.83■■□□□ 1.25
THBS1P07996 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
THBS1P07996 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.83■■□□□ 1.25
THBS1P07996 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
THBS1P07996 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
THBS1P07996 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
THBS1P07996 AC142472.1-201ENST00000612013 1741 ntBASIC22.82■■□□□ 1.24
THBS1P07996 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.82■■□□□ 1.24
THBS1P07996 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
THBS1P07996 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.82■■□□□ 1.24
THBS1P07996 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
THBS1P07996 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
THBS1P07996 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
THBS1P07996 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.81■■□□□ 1.24
THBS1P07996 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
THBS1P07996 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
THBS1P07996 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
THBS1P07996 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
THBS1P07996 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
THBS1P07996 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
THBS1P07996 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
THBS1P07996 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
THBS1P07996 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
THBS1P07996 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
THBS1P07996 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
THBS1P07996 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms