Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC129492.7-201ENST00000622992 756 ntBASIC23.24■■□□□ 1.31
PDGFAP04085 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
PDGFAP04085 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFAP04085 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFAP04085 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFAP04085 DUX4L18-201ENST00000553347 1267 ntBASIC23.22■■□□□ 1.31
PDGFAP04085 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFAP04085 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFAP04085 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.22■■□□□ 1.31
PDGFAP04085 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
PDGFAP04085 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDGFAP04085 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.21■■□□□ 1.31
PDGFAP04085 AC007029.1-201ENST00000604183 313 ntBASIC23.21■■□□□ 1.31
PDGFAP04085 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PDGFAP04085 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDGFAP04085 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDGFAP04085 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
PDGFAP04085 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.2■■□□□ 1.3
PDGFAP04085 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDGFAP04085 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.2■■□□□ 1.3
PDGFAP04085 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.2■■□□□ 1.3
PDGFAP04085 AL592293.1-201ENST00000502889 1188 ntBASIC23.2■■□□□ 1.3
PDGFAP04085 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PDGFAP04085 AC009831.1-201ENST00000580420 1582 ntBASIC23.19■■□□□ 1.3
PDGFAP04085 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFAP04085 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFAP04085 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFAP04085 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
PDGFAP04085 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDGFAP04085 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDGFAP04085 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.18■■□□□ 1.3
PDGFAP04085 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDGFAP04085 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDGFAP04085 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDGFAP04085 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.17■■□□□ 1.3
PDGFAP04085 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.17■■□□□ 1.3
PDGFAP04085 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFAP04085 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFAP04085 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFAP04085 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.16■■□□□ 1.3
PDGFAP04085 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFAP04085 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.16■■□□□ 1.3
PDGFAP04085 AC133552.2-201ENST00000619106 1032 ntBASIC23.16■■□□□ 1.3
PDGFAP04085 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFAP04085 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PDGFAP04085 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.15■■□□□ 1.3
PDGFAP04085 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFAP04085 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.15■■□□□ 1.3
PDGFAP04085 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDGFAP04085 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDGFAP04085 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDGFAP04085 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFAP04085 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.13■■□□□ 1.29
PDGFAP04085 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFAP04085 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDGFAP04085 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PDGFAP04085 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDGFAP04085 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDGFAP04085 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.11■■□□□ 1.29
PDGFAP04085 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDGFAP04085 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFAP04085 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFAP04085 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
PDGFAP04085 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFAP04085 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFAP04085 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDGFAP04085 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.1■■□□□ 1.29
PDGFAP04085 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFAP04085 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFAP04085 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFAP04085 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFAP04085 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PDGFAP04085 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.08■■□□□ 1.29
PDGFAP04085 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDGFAP04085 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDGFAP04085 AL035685.1-201ENST00000636663 812 ntBASIC23.08■■□□□ 1.29
PDGFAP04085 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDGFAP04085 SMPD5-203ENST00000639008 1464 ntBASIC23.08■■□□□ 1.29
PDGFAP04085 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDGFAP04085 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.08■■□□□ 1.28
PDGFAP04085 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.07■■□□□ 1.28
PDGFAP04085 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PDGFAP04085 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
PDGFAP04085 AC026202.3-201ENST00000600805 1127 ntBASIC23.07■■□□□ 1.28
PDGFAP04085 AL451085.2-201ENST00000605085 799 ntBASIC23.07■■□□□ 1.28
PDGFAP04085 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PDGFAP04085 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.07■■□□□ 1.28
PDGFAP04085 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFAP04085 AL359258.2-201ENST00000564063 1566 ntBASIC23.06■■□□□ 1.28
PDGFAP04085 AC100797.4-201ENST00000631653 1827 ntBASIC23.06■■□□□ 1.28
PDGFAP04085 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PDGFAP04085 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFAP04085 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFAP04085 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFAP04085 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms