Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
CD4P01730 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CD4P01730 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CD4P01730 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CD4P01730 AL035685.1-201ENST00000636663 812 ntBASIC27.88■■■□□ 2.05
CD4P01730 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CD4P01730 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CD4P01730 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.87■■■□□ 2.05
CD4P01730 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CD4P01730 AC026202.3-201ENST00000600805 1127 ntBASIC27.87■■■□□ 2.05
CD4P01730 AL451085.2-201ENST00000605085 799 ntBASIC27.87■■■□□ 2.05
CD4P01730 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
CD4P01730 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CD4P01730 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CD4P01730 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CD4P01730 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
CD4P01730 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.85■■■□□ 2.05
CD4P01730 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.85■■■□□ 2.05
CD4P01730 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CD4P01730 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
CD4P01730 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CD4P01730 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
CD4P01730 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.83■■■□□ 2.05
CD4P01730 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CD4P01730 AC025884.2-201ENST00000553429 711 ntBASIC27.83■■■□□ 2.05
CD4P01730 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.83■■■□□ 2.05
CD4P01730 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.83■■■□□ 2.05
CD4P01730 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CD4P01730 AL359258.2-201ENST00000564063 1566 ntBASIC27.82■■■□□ 2.04
CD4P01730 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CD4P01730 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
CD4P01730 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
CD4P01730 AP004833.2-201ENST00000532228 1454 ntBASIC27.81■■■□□ 2.04
CD4P01730 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.81■■■□□ 2.04
CD4P01730 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.81■■■□□ 2.04
CD4P01730 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CD4P01730 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CD4P01730 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CD4P01730 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.79■■■□□ 2.04
CD4P01730 DUX4L9-201ENST00000449051 1259 ntBASIC27.78■■■□□ 2.04
CD4P01730 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.78■■■□□ 2.04
CD4P01730 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.78■■■□□ 2.04
CD4P01730 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.78■■■□□ 2.04
CD4P01730 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CD4P01730 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CD4P01730 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.76■■■□□ 2.04
CD4P01730 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CD4P01730 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.76■■■□□ 2.03
CD4P01730 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CD4P01730 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.76■■■□□ 2.03
CD4P01730 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.76■■■□□ 2.03
CD4P01730 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
CD4P01730 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CD4P01730 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CD4P01730 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CD4P01730 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CD4P01730 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CD4P01730 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.75■■■□□ 2.03
CD4P01730 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CD4P01730 RP9P-202ENST00000450133 1212 ntBASIC27.74■■■□□ 2.03
CD4P01730 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CD4P01730 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
CD4P01730 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CD4P01730 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.73■■■□□ 2.03
CD4P01730 RAP2CP1-202ENST00000605179 643 ntBASIC27.73■■■□□ 2.03
CD4P01730 AC100797.4-201ENST00000631653 1827 ntBASIC27.73■■■□□ 2.03
CD4P01730 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CD4P01730 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CD4P01730 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
CD4P01730 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.72■■■□□ 2.03
CD4P01730 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CD4P01730 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
CD4P01730 SPCS2P3-201ENST00000500401 656 ntBASIC27.71■■■□□ 2.03
CD4P01730 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.71■■■□□ 2.03
CD4P01730 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.71■■■□□ 2.03
CD4P01730 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CD4P01730 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CD4P01730 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.7■■■□□ 2.02
CD4P01730 AC093536.1-201ENST00000569153 554 ntBASIC27.7■■■□□ 2.02
CD4P01730 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.7■■■□□ 2.02
CD4P01730 ABCB10P1-201ENST00000614297 2181 ntBASIC27.7■■■□□ 2.02
CD4P01730 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
CD4P01730 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CD4P01730 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.69■■■□□ 2.02
CD4P01730 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
CD4P01730 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.69■■■□□ 2.02
CD4P01730 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.69■■■□□ 2.02
CD4P01730 AC010980.1-201ENST00000587192 1142 ntBASIC27.69■■■□□ 2.02
CD4P01730 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CD4P01730 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CD4P01730 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CD4P01730 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CD4P01730 AC074183.2-201ENST00000623112 922 ntBASIC27.68■■■□□ 2.02
CD4P01730 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CD4P01730 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CD4P01730 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
CD4P01730 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.67■■■□□ 2.02
CD4P01730 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CD4P01730 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.66■■■□□ 2.02
CD4P01730 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms