Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOMM40O96008 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOMM40O96008 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TOMM40O96008 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.39■□□□□ 0.69
TOMM40O96008 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TOMM40O96008 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TOMM40O96008 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.39■□□□□ 0.69
TOMM40O96008 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOMM40O96008 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TOMM40O96008 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.38■□□□□ 0.69
TOMM40O96008 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.38■□□□□ 0.69
TOMM40O96008 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOMM40O96008 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOMM40O96008 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOMM40O96008 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOMM40O96008 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.37■□□□□ 0.69
TOMM40O96008 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TOMM40O96008 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOMM40O96008 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOMM40O96008 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TOMM40O96008 AC110285.7-201ENST00000624417 1536 ntBASIC19.36■□□□□ 0.69
TOMM40O96008 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.36■□□□□ 0.69
TOMM40O96008 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TOMM40O96008 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TOMM40O96008 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TOMM40O96008 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.36■□□□□ 0.69
TOMM40O96008 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.35■□□□□ 0.69
TOMM40O96008 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TOMM40O96008 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TOMM40O96008 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOMM40O96008 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOMM40O96008 AL449106.1-201ENST00000608517 1980 ntBASIC19.34■□□□□ 0.69
TOMM40O96008 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOMM40O96008 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.34■□□□□ 0.69
TOMM40O96008 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TOMM40O96008 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOMM40O96008 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.34■□□□□ 0.69
TOMM40O96008 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOMM40O96008 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.33■□□□□ 0.69
TOMM40O96008 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TOMM40O96008 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.33■□□□□ 0.69
TOMM40O96008 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOMM40O96008 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TOMM40O96008 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOMM40O96008 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOMM40O96008 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TOMM40O96008 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TOMM40O96008 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOMM40O96008 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOMM40O96008 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOMM40O96008 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOMM40O96008 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.32■□□□□ 0.68
TOMM40O96008 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.32■□□□□ 0.68
TOMM40O96008 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TOMM40O96008 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.32■□□□□ 0.68
TOMM40O96008 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOMM40O96008 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.31■□□□□ 0.68
TOMM40O96008 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOMM40O96008 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOMM40O96008 AC021231.2-201ENST00000594613 730 ntBASIC19.31■□□□□ 0.68
TOMM40O96008 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOMM40O96008 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.3■□□□□ 0.68
TOMM40O96008 DUX4L29-201ENST00000425409 679 ntBASIC19.3■□□□□ 0.68
TOMM40O96008 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOMM40O96008 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOMM40O96008 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOMM40O96008 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TOMM40O96008 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOMM40O96008 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.29■□□□□ 0.68
TOMM40O96008 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.29■□□□□ 0.68
TOMM40O96008 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.28■□□□□ 0.68
TOMM40O96008 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOMM40O96008 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.28■□□□□ 0.68
TOMM40O96008 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOMM40O96008 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.28■□□□□ 0.68
TOMM40O96008 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOMM40O96008 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOMM40O96008 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOMM40O96008 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.26■□□□□ 0.67
TOMM40O96008 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOMM40O96008 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.26■□□□□ 0.67
TOMM40O96008 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOMM40O96008 AC091060.1-201ENST00000623524 1766 ntBASIC19.26■□□□□ 0.67
TOMM40O96008 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOMM40O96008 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOMM40O96008 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.25■□□□□ 0.67
TOMM40O96008 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TOMM40O96008 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TOMM40O96008 AP004609.3-201ENST00000610705 1884 ntBASIC19.24■□□□□ 0.67
TOMM40O96008 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TOMM40O96008 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TOMM40O96008 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.24■□□□□ 0.67
TOMM40O96008 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.24■□□□□ 0.67
TOMM40O96008 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.24■□□□□ 0.67
TOMM40O96008 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms