Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
PCF11O94913 AL033527.3-201ENST00000566366 1196 ntBASIC39.59■■■■□ 3.93
PCF11O94913 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC39.58■■■■□ 3.93
PCF11O94913 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC39.57■■■■□ 3.92
PCF11O94913 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
PCF11O94913 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC39.56■■■■□ 3.92
PCF11O94913 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
PCF11O94913 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC39.55■■■■□ 3.92
PCF11O94913 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
PCF11O94913 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC39.55■■■■□ 3.92
PCF11O94913 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC39.55■■■■□ 3.92
PCF11O94913 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC39.54■■■■□ 3.92
PCF11O94913 AC025884.2-201ENST00000553429 711 ntBASIC39.54■■■■□ 3.92
PCF11O94913 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
PCF11O94913 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC39.53■■■■□ 3.92
PCF11O94913 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
PCF11O94913 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC39.53■■■■□ 3.92
PCF11O94913 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
PCF11O94913 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
PCF11O94913 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
PCF11O94913 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC39.5■■■■□ 3.91
PCF11O94913 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PCF11O94913 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
PCF11O94913 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC39.5■■■■□ 3.91
PCF11O94913 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC39.5■■■■□ 3.91
PCF11O94913 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC39.49■■■■□ 3.91
PCF11O94913 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC39.49■■■■□ 3.91
PCF11O94913 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC39.48■■■■□ 3.91
PCF11O94913 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC39.47■■■■□ 3.91
PCF11O94913 AL359258.2-201ENST00000564063 1566 ntBASIC39.47■■■■□ 3.91
PCF11O94913 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
PCF11O94913 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC39.46■■■■□ 3.91
PCF11O94913 AC009831.1-201ENST00000580420 1582 ntBASIC39.46■■■■□ 3.91
PCF11O94913 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
PCF11O94913 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC39.46■■■■□ 3.91
PCF11O94913 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
PCF11O94913 REST-210ENST00000638187 1334 ntTSL 5 BASIC39.44■■■■□ 3.9
PCF11O94913 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
PCF11O94913 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC39.44■■■■□ 3.9
PCF11O94913 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC39.44■■■■□ 3.9
PCF11O94913 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
PCF11O94913 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC39.42■■■■□ 3.9
PCF11O94913 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
PCF11O94913 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
PCF11O94913 AC004987.1-201ENST00000428627 508 ntBASIC39.41■■■■□ 3.9
PCF11O94913 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC39.41■■■■□ 3.9
PCF11O94913 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
PCF11O94913 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC39.41■■■■□ 3.9
PCF11O94913 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC39.4■■■■□ 3.9
PCF11O94913 AL592293.1-201ENST00000502889 1188 ntBASIC39.4■■■■□ 3.9
PCF11O94913 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PCF11O94913 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PCF11O94913 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PCF11O94913 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC39.38■■■■□ 3.9
PCF11O94913 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.38■■■■□ 3.89
PCF11O94913 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
PCF11O94913 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
PCF11O94913 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC39.38■■■■□ 3.89
PCF11O94913 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
PCF11O94913 TSPY13P-201ENST00000338964 914 ntBASIC39.38■■■■□ 3.89
PCF11O94913 RARRES2P1-201ENST00000474487 481 ntBASIC39.38■■■■□ 3.89
PCF11O94913 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC39.38■■■■□ 3.89
PCF11O94913 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
PCF11O94913 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC39.36■■■■□ 3.89
PCF11O94913 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC39.35■■■■□ 3.89
PCF11O94913 ATP5G2P3-201ENST00000429083 425 ntBASIC39.35■■■■□ 3.89
PCF11O94913 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC39.35■■■■□ 3.89
PCF11O94913 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
PCF11O94913 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
PCF11O94913 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC39.34■■■■□ 3.89
PCF11O94913 AC129492.7-201ENST00000622992 756 ntBASIC39.33■■■■□ 3.89
PCF11O94913 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
PCF11O94913 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC39.33■■■■□ 3.89
PCF11O94913 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
PCF11O94913 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC39.33■■■■□ 3.89
PCF11O94913 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
PCF11O94913 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
PCF11O94913 AL592295.1-201ENST00000400984 884 ntBASIC39.3■■■■□ 3.88
PCF11O94913 HES4-204ENST00000484667 667 ntTSL 3 BASIC39.3■■■■□ 3.88
PCF11O94913 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
PCF11O94913 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC39.29■■■■□ 3.88
PCF11O94913 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC39.29■■■■□ 3.88
PCF11O94913 AC093536.1-201ENST00000569153 554 ntBASIC39.29■■■■□ 3.88
PCF11O94913 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC39.29■■■■□ 3.88
PCF11O94913 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
PCF11O94913 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
PCF11O94913 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC39.28■■■■□ 3.88
PCF11O94913 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
PCF11O94913 GUK1-208ENST00000366728 842 ntTSL 2 BASIC39.27■■■■□ 3.88
PCF11O94913 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC39.27■■■■□ 3.88
PCF11O94913 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
PCF11O94913 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC39.26■■■■□ 3.88
PCF11O94913 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
PCF11O94913 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
PCF11O94913 RAP2CP1-202ENST00000605179 643 ntBASIC39.26■■■■□ 3.88
PCF11O94913 SMPD5-203ENST00000639008 1464 ntBASIC39.26■■■■□ 3.87
PCF11O94913 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC39.25■■■■□ 3.87
PCF11O94913 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC39.25■■■■□ 3.87
PCF11O94913 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC39.25■■■■□ 3.87
PCF11O94913 AC026202.3-201ENST00000600805 1127 ntBASIC39.24■■■■□ 3.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms