Protein–RNA interactions for Protein: O60930

RNASEH1, Ribonuclease H1, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1O60930 AL139393.2-201ENST00000608721 2025 ntBASIC25.48■■□□□ 1.67
RNASEH1O60930 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNASEH1O60930 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.48■■□□□ 1.67
RNASEH1O60930 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.48■■□□□ 1.67
RNASEH1O60930 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNASEH1O60930 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNASEH1O60930 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNASEH1O60930 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RNASEH1O60930 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNASEH1O60930 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNASEH1O60930 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.46■■□□□ 1.67
RNASEH1O60930 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
RNASEH1O60930 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNASEH1O60930 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.46■■□□□ 1.67
RNASEH1O60930 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.67
RNASEH1O60930 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNASEH1O60930 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNASEH1O60930 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.44■■□□□ 1.66
RNASEH1O60930 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNASEH1O60930 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RNASEH1O60930 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.43■■□□□ 1.66
RNASEH1O60930 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.43■■□□□ 1.66
RNASEH1O60930 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNASEH1O60930 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNASEH1O60930 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNASEH1O60930 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.42■■□□□ 1.66
RNASEH1O60930 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNASEH1O60930 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.41■■□□□ 1.66
RNASEH1O60930 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNASEH1O60930 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
RNASEH1O60930 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.41■■□□□ 1.66
RNASEH1O60930 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNASEH1O60930 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNASEH1O60930 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNASEH1O60930 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNASEH1O60930 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNASEH1O60930 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNASEH1O60930 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.38■■□□□ 1.65
RNASEH1O60930 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RNASEH1O60930 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.38■■□□□ 1.65
RNASEH1O60930 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.38■■□□□ 1.65
RNASEH1O60930 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNASEH1O60930 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RNASEH1O60930 AC092296.2-201ENST00000589470 999 ntBASIC25.37■■□□□ 1.65
RNASEH1O60930 NTF6A-201ENST00000591175 560 ntBASIC25.37■■□□□ 1.65
RNASEH1O60930 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNASEH1O60930 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNASEH1O60930 ECEL1P2-201ENST00000461596 1295 ntBASIC25.36■■□□□ 1.65
RNASEH1O60930 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNASEH1O60930 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.35■■□□□ 1.65
RNASEH1O60930 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNASEH1O60930 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RNASEH1O60930 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNASEH1O60930 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.34■■□□□ 1.65
RNASEH1O60930 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNASEH1O60930 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.34■■□□□ 1.65
RNASEH1O60930 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RNASEH1O60930 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNASEH1O60930 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.33■■□□□ 1.65
RNASEH1O60930 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RNASEH1O60930 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.33■■□□□ 1.65
RNASEH1O60930 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNASEH1O60930 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RNASEH1O60930 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNASEH1O60930 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.32■■□□□ 1.64
RNASEH1O60930 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.31■■□□□ 1.64
RNASEH1O60930 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNASEH1O60930 AP002414.2-202ENST00000590929 1450 ntBASIC25.31■■□□□ 1.64
RNASEH1O60930 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNASEH1O60930 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.31■■□□□ 1.64
RNASEH1O60930 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNASEH1O60930 AC142086.6-201ENST00000621154 1765 ntBASIC25.31■■□□□ 1.64
RNASEH1O60930 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNASEH1O60930 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.3■■□□□ 1.64
RNASEH1O60930 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNASEH1O60930 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNASEH1O60930 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNASEH1O60930 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNASEH1O60930 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.29■■□□□ 1.64
RNASEH1O60930 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
RNASEH1O60930 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
RNASEH1O60930 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.29■■□□□ 1.64
RNASEH1O60930 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNASEH1O60930 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNASEH1O60930 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.28■■□□□ 1.64
RNASEH1O60930 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RNASEH1O60930 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNASEH1O60930 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNASEH1O60930 AL359258.2-201ENST00000564063 1566 ntBASIC25.27■■□□□ 1.64
RNASEH1O60930 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNASEH1O60930 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNASEH1O60930 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNASEH1O60930 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.27■■□□□ 1.64
RNASEH1O60930 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.27■■□□□ 1.64
RNASEH1O60930 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms