Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.56e-7■■□□□ 13.8
EIF3DO15371 AMPD2-204ENST00000369840 3130 ntAPPRIS ALT2 TSL 511.34□□□□□ -0.596e-7■■□□□ 13.8
EIF3DO15371 DNMT1-219ENST00000589349 603 ntTSL 48.79□□□□□ -16e-7■■□□□ 13.8
EIF3DO15371 DNMT1-224ENST00000591764 341 ntTSL 1 (best)8.67□□□□□ -1.026e-7■■□□□ 13.8
EIF3DO15371 HECTD4-210ENST00000549306 543 ntTSL 23.71□□□□□ -1.826e-7■■□□□ 13.8
EIF3DO15371 CHD8-212ENST00000557329 578 ntTSL 23.51□□□□□ -1.856e-7■■□□□ 13.8
EIF3DO15371 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.13■□□□□ 0.011e-7■■□□□ 13.8
EIF3DO15371 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.47□□□□□ -0.091e-7■■□□□ 13.8
EIF3DO15371 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.215e-6■■□□□ 13.8
EIF3DO15371 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.622e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.6■□□□□ 0.412e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-217ENST00000510984 505 ntTSL 317.27■□□□□ 0.362e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-212ENST00000508045 1112 ntTSL 1 (best)16.15■□□□□ 0.182e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-206ENST00000504563 840 ntTSL 515.48■□□□□ 0.072e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-214ENST00000508482 1597 ntTSL 214.33□□□□□ -0.122e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-213ENST00000508218 533 ntTSL 213.82□□□□□ -0.22e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-215ENST00000509335 582 ntTSL 213.41□□□□□ -0.262e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-207ENST00000505619 658 ntTSL 313.39□□□□□ -0.272e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.812e-7■■□□□ 13.7
EIF3DO15371 LUC7L3-210ENST00000507200 510 ntTSL 43.84□□□□□ -1.792e-7■■□□□ 13.7
EIF3DO15371 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.12■□□□□ 0.653e-6■■□□□ 13.7
EIF3DO15371 VPS13B-206ENST00000496144 5625 ntTSL 59.14□□□□□ -0.953e-6■■□□□ 13.7
EIF3DO15371 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.223e-6■■□□□ 13.7
EIF3DO15371 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.393e-6■■□□□ 13.7
EIF3DO15371 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.587e-10■■□□□ 13.7
EIF3DO15371 CMC2-222ENST00000570086 801 ntTSL 317.38■□□□□ 0.377e-10■■□□□ 13.7
EIF3DO15371 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.38■□□□□ 0.377e-10■■□□□ 13.7
EIF3DO15371 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.59■□□□□ 0.097e-10■■□□□ 13.7
EIF3DO15371 CMC2-220ENST00000569187 612 ntTSL 215.59■□□□□ 0.097e-10■■□□□ 13.7
EIF3DO15371 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.59■□□□□ 0.097e-10■■□□□ 13.7
EIF3DO15371 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.31■□□□□ 0.047e-10■■□□□ 13.7
EIF3DO15371 CMC2-205ENST00000562828 438 ntTSL 215.31■□□□□ 0.047e-10■■□□□ 13.7
EIF3DO15371 CMC2-211ENST00000565613 663 ntTSL 515.31■□□□□ 0.047e-10■■□□□ 13.7
EIF3DO15371 CMC2-210ENST00000565514 262 ntTSL 314.74□□□□□ -0.057e-10■■□□□ 13.7
EIF3DO15371 CMC2-202ENST00000486645 766 ntTSL 3 BASIC13.98□□□□□ -0.177e-10■■□□□ 13.7
EIF3DO15371 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.357e-10■■□□□ 13.7
EIF3DO15371 CMC2-219ENST00000568228 825 ntTSL 312.59□□□□□ -0.397e-10■■□□□ 13.7
EIF3DO15371 CMC2-223ENST00000570195 871 ntTSL 3 BASIC11.63□□□□□ -0.557e-10■■□□□ 13.7
EIF3DO15371 CMC2-218ENST00000567593 919 ntTSL 311.63□□□□□ -0.557e-10■■□□□ 13.7
EIF3DO15371 CMC2-207ENST00000564174 424 ntTSL 3 BASIC10.98□□□□□ -0.657e-10■■□□□ 13.7
EIF3DO15371 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.117e-10■■□□□ 13.7
EIF3DO15371 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.031e-6■■□□□ 13.6
EIF3DO15371 DHRS3-201ENST00000430996 826 ntTSL 320.57■□□□□ 0.881e-6■■□□□ 13.6
EIF3DO15371 DHRS3-203ENST00000482265 1036 ntTSL 316.64■□□□□ 0.251e-6■■□□□ 13.6
EIF3DO15371 DHRS3-202ENST00000464917 539 ntTSL 314.01□□□□□ -0.171e-6■■□□□ 13.6
EIF3DO15371 PKD1-230ENST00000565639 1976 ntTSL 521.34■■□□□ 1.012e-6■■□□□ 13.6
EIF3DO15371 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.73□□□□□ -1.012e-6■■□□□ 13.6
EIF3DO15371 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.04□□□□□ -1.282e-6■■□□□ 13.6
EIF3DO15371 CAD-208ENST00000479002 614 ntTSL 517.75■□□□□ 0.432e-6■■□□□ 13.6
EIF3DO15371 H2AFZ-202ENST00000511203 1880 ntTSL 232.98■■■□□ 2.878e-10■■□□□ 13.6
EIF3DO15371 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)31.42■■■□□ 2.628e-10■■□□□ 13.6
EIF3DO15371 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.428e-10■■□□□ 13.6
EIF3DO15371 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)14.84□□□□□ -0.038e-10■■□□□ 13.6
EIF3DO15371 H2AFZ-205ENST00000527366 435 ntTSL 312.76□□□□□ -0.378e-10■■□□□ 13.6
EIF3DO15371 H2AFZ-206ENST00000529158 726 ntTSL 310.61□□□□□ -0.718e-10■■□□□ 13.6
EIF3DO15371 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC13.21□□□□□ -0.298e-6■■□□□ 13.6
EIF3DO15371 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.678e-6■■□□□ 13.6
EIF3DO15371 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.219e-7■■□□□ 13.6
EIF3DO15371 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.06■□□□□ 0.169e-7■■□□□ 13.6
EIF3DO15371 ILF2-204ENST00000480213 1008 ntTSL 57.98□□□□□ -1.139e-7■■□□□ 13.6
EIF3DO15371 SKI-202ENST00000478223 294 ntTSL 312.67□□□□□ -0.386e-7■■□□□ 13.5
EIF3DO15371 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.66■■■□□ 2.186e-7■■□□□ 13.5
EIF3DO15371 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.81■■□□□ 1.726e-7■■□□□ 13.5
EIF3DO15371 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.556e-7■■□□□ 13.5
EIF3DO15371 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.556e-7■■□□□ 13.5
EIF3DO15371 AMZ2-209ENST00000580548 829 ntTSL 523.88■■□□□ 1.416e-7■■□□□ 13.5
EIF3DO15371 AMZ2-207ENST00000578175 2276 ntTSL 523.67■■□□□ 1.386e-7■■□□□ 13.5
EIF3DO15371 AMZ2-211ENST00000580837 713 ntTSL 520.71■□□□□ 0.916e-7■■□□□ 13.5
EIF3DO15371 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.676e-7■■□□□ 13.5
EIF3DO15371 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.496e-7■■□□□ 13.5
EIF3DO15371 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.416e-7■■□□□ 13.5
EIF3DO15371 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.7■□□□□ 0.16e-7■■□□□ 13.5
EIF3DO15371 AMZ2-208ENST00000579724 722 ntTSL 515.38■□□□□ 0.056e-7■■□□□ 13.5
EIF3DO15371 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.026e-7■■□□□ 13.5
EIF3DO15371 AMZ2-217ENST00000584837 672 ntTSL 514.65□□□□□ -0.066e-7■■□□□ 13.5
EIF3DO15371 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC13.01□□□□□ -0.336e-7■■□□□ 13.5
EIF3DO15371 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.066e-7■■□□□ 13.5
EIF3DO15371 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.136e-7■■□□□ 13.5
EIF3DO15371 AMZ2-215ENST00000584494 897 ntTSL 37.51□□□□□ -1.216e-7■■□□□ 13.5
EIF3DO15371 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.77□□□□□ -1.496e-7■■□□□ 13.5
EIF3DO15371 ATM-204ENST00000524792 5912 ntTSL 24.83□□□□□ -1.646e-7■■□□□ 13.5
EIF3DO15371 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.696e-7■■□□□ 13.5
EIF3DO15371 ATM-221ENST00000533690 3354 ntTSL 54.36□□□□□ -1.716e-7■■□□□ 13.5
EIF3DO15371 RBPMS-219ENST00000523115 449 ntTSL 33.77□□□□□ -1.816e-7■■□□□ 13.5
EIF3DO15371 USP34-205ENST00000453734 2708 ntTSL 1 (best)2.76□□□□□ -1.976e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.43■□□□□ 0.381e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.291e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.52■□□□□ 0.241e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.45■□□□□ 0.221e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.38■□□□□ 0.211e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.081e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.4■□□□□ 0.061e-7■■□□□ 13.5
EIF3DO15371 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)15.21■□□□□ 0.031e-7■■□□□ 13.5
EIF3DO15371 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.98■□□□□ 0.631e-6■■□□□ 13.5
EIF3DO15371 SEPT9-235ENST00000591020 582 ntTSL 412.14□□□□□ -0.471e-6■■□□□ 13.5
EIF3DO15371 SKI-204ENST00000508416 252 ntTSL 311.53□□□□□ -0.565e-7■■□□□ 13.5
EIF3DO15371 PKD1P1-201ENST00000458669 6805 ntBASIC18.28■□□□□ 0.521e-7■■□□□ 13.4
EIF3DO15371 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.563e-6■■□□□ 13.4
EIF3DO15371 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.413e-6■■□□□ 13.4
EIF3DO15371 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.13■□□□□ 0.333e-6■■□□□ 13.4
Retrieved 100 of 4,069 protein–RNA pairs in 142 ms