RNA–Protein interactions for RNA: ENST00000524792.5

ATM-204, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2

Gene ATM, Length 5,912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-204ENST00000524792 DCAF8L2P0C7V8 631 aa7.33□□□□□ -1.24
ATM-204ENST00000524792 NISCHQ9Y2I1 1504 aa6.82□□□□□ -1.32
ATM-204ENST00000524792 FAM9AQ8IZU1 332 aaPredicted RBP6.67□□□□□ -1.34
ATM-204ENST00000524792 AEBP2Q6ZN18 517 aaPredicted RBP6.64□□□□□ -1.35
ATM-204ENST00000524792 ABCC9O60706 1549 aa6.53□□□□□ -1.36
ATM-204ENST00000524792 TRIM41Q8WV44 630 aa6.45□□□□□ -1.38
ATM-204ENST00000524792 TRHP20396 242 aaPredicted RBP6.39□□□□□ -1.39
ATM-204ENST00000524792 PABPN1Q86U42 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
ATM-204ENST00000524792 MYT1LQ9UL68 1186 aa6.3□□□□□ -1.4
ATM-204ENST00000524792 CHIC1Q5VXU3 224 aa6.3□□□□□ -1.4
ATM-204ENST00000524792 FBLN2P98095 1184 aa6.25□□□□□ -1.41
ATM-204ENST00000524792 NPM1P06748 294 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATM-204ENST00000524792 TTBK1Q5TCY1 1321 aaPredicted RBP6.19□□□□□ -1.42
ATM-204ENST00000524792 EHMT2Q96KQ7 1210 aa6.17□□□□□ -1.42
ATM-204ENST00000524792 TRIM26Q12899 539 aaPredicted RBP6.16□□□□□ -1.42
ATM-204ENST00000524792 ERCC6Q03468 1493 aa6.14□□□□□ -1.43
ATM-204ENST00000524792 PELP1Q8IZL8 1130 aaKnown RBP6.12□□□□□ -1.43
ATM-204ENST00000524792 PLPPR3Q6T4P5 718 aa6.12□□□□□ -1.43
ATM-204ENST00000524792 ESF1Q9H501 851 aaKnown RBP6.11□□□□□ -1.43
ATM-204ENST00000524792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.1□□□□□ -1.43
ATM-204ENST00000524792 HNRNPUL2Q1KMD3 747 aaKnown RBP6.1□□□□□ -1.43
ATM-204ENST00000524792 ATP1B4Q9UN42 357 aaPredicted RBP6.05□□□□□ -1.44
ATM-204ENST00000524792 SCAF1Q9H7N4 1312 aaKnown RBP6□□□□□ -1.45
ATM-204ENST00000524792 SHROOM4Q9ULL8 1493 aa5.99□□□□□ -1.45
ATM-204ENST00000524792 FOXD1Q16676 465 aa5.97□□□□□ -1.45
ATM-204ENST00000524792 DCAF8L1A6NGE4 600 aa5.97□□□□□ -1.45
ATM-204ENST00000524792 CHMP7Q8WUX9 453 aaPredicted RBP5.96□□□□□ -1.45
ATM-204ENST00000524792 ARID4BQ4LE39 1312 aaPredicted RBP5.96□□□□□ -1.46
ATM-204ENST00000524792 PHF23Q9BUL5 403 aaPredicted RBP5.95□□□□□ -1.46
ATM-204ENST00000524792 BCANQ96GW7 911 aa5.94□□□□□ -1.46
ATM-204ENST00000524792 OSCARQ8IYS5 282 aa5.92□□□□□ -1.46
ATM-204ENST00000524792 RB1CC1Q8TDY2 1594 aa5.91□□□□□ -1.46
ATM-204ENST00000524792 APLP2Q06481 763 aa5.91□□□□□ -1.46
ATM-204ENST00000524792 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
ATM-204ENST00000524792 RANGAP1P46060 587 aaPredicted RBP5.9□□□□□ -1.46
ATM-204ENST00000524792 SUPT5HO00267 1087 aaKnown RBP5.9□□□□□ -1.47
ATM-204ENST00000524792 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
ATM-204ENST00000524792 CCER1Q8TC90 406 aaPredicted RBP5.87□□□□□ -1.47
ATM-204ENST00000524792 CECR2Q9BXF3 1484 aa5.86□□□□□ -1.47
ATM-204ENST00000524792 DNAJC5Q9H3Z4 198 aa5.86□□□□□ -1.47
ATM-204ENST00000524792 SENP3Q9H4L4 574 aaPredicted RBP5.83□□□□□ -1.48
ATM-204ENST00000524792 STAG3Q9UJ98 1225 aa5.8□□□□□ -1.48
ATM-204ENST00000524792 C14orf37Q86TY3 774 aa5.78□□□□□ -1.48
ATM-204ENST00000524792 DNAJC5BQ9UF47 199 aa5.77□□□□□ -1.49
ATM-204ENST00000524792 A0A0G2JS52 829 aa5.75□□□□□ -1.49
ATM-204ENST00000524792 MYT1Q01538 1121 aa5.75□□□□□ -1.49
ATM-204ENST00000524792 HAP1P54257 671 aaPredicted RBP5.74□□□□□ -1.49
ATM-204ENST00000524792 SCRIBQ14160 1630 aa5.73□□□□□ -1.49
ATM-204ENST00000524792 MEX3CQ5U5Q3 659 aaKnown RBP5.71□□□□□ -1.5
ATM-204ENST00000524792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.71□□□□□ -1.54e-7■■□□□ 12.7
ATM-204ENST00000524792 SLC24A1O60721 1099 aa5.7□□□□□ -1.5
ATM-204ENST00000524792 PDS5BQ9NTI5 1447 aa5.7□□□□□ -1.5
ATM-204ENST00000524792 KCNH8Q96L42 1107 aa5.68□□□□□ -1.5
ATM-204ENST00000524792 UBTFP17480 764 aaKnown RBP5.67□□□□□ -1.5
ATM-204ENST00000524792 MLECQ14165 292 aa5.67□□□□□ -1.5
ATM-204ENST00000524792 NACADO15069 1562 aa5.67□□□□□ -1.5
ATM-204ENST00000524792 ARID3CA6NKF2 412 aa5.65□□□□□ -1.51
ATM-204ENST00000524792 CDK11AQ9UQ88 783 aaPredicted RBP5.65□□□□□ -1.51
ATM-204ENST00000524792 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
ATM-204ENST00000524792 FAM69CQ0P6D2 419 aa5.64□□□□□ -1.51
ATM-204ENST00000524792 KCNA4P22459 653 aa5.63□□□□□ -1.51
ATM-204ENST00000524792 PPP1R15AO75807 674 aaPredicted RBP5.6□□□□□ -1.51
ATM-204ENST00000524792 SLC4A1APQ9BWU0 796 aaKnown RBP5.6□□□□□ -1.51
ATM-204ENST00000524792 RTN4Q9NQC3 1192 aaKnown RBP5.59□□□□□ -1.51
ATM-204ENST00000524792 DMRT2Q9Y5R5 561 aa5.59□□□□□ -1.51
ATM-204ENST00000524792 DISP3Q9P2K9 1392 aa5.59□□□□□ -1.51
ATM-204ENST00000524792 ADRA2BP18089 450 aa5.59□□□□□ -1.52
ATM-204ENST00000524792 NEUROD1Q13562 356 aa5.59□□□□□ -1.52
ATM-204ENST00000524792 NEFLP07196 543 aa5.58□□□□□ -1.52
ATM-204ENST00000524792 CCDC9Q9Y3X0 531 aaKnown RBP5.58□□□□□ -1.52
ATM-204ENST00000524792 CLSPNQ9HAW4 1339 aa5.57□□□□□ -1.52
ATM-204ENST00000524792 CHGAP10645 457 aaKnown RBP5.57□□□□□ -1.52
ATM-204ENST00000524792 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
ATM-204ENST00000524792 PIP4K2BP78356 416 aa5.56□□□□□ -1.52
ATM-204ENST00000524792 ANO8Q9HCE9 1232 aaPredicted RBP5.56□□□□□ -1.52
ATM-204ENST00000524792 CCDC180Q9P1Z9 1646 aa5.55□□□□□ -1.52
ATM-204ENST00000524792 BAZ1BQ9UIG0 1483 aaKnown RBP5.55□□□□□ -1.52
ATM-204ENST00000524792 PLEKHG5O94827 1062 aa5.54□□□□□ -1.52
ATM-204ENST00000524792 TRIM52Q96A61 297 aa5.52□□□□□ -1.53
ATM-204ENST00000524792 PPP1R1BQ9UD71 204 aaPredicted RBP5.52□□□□□ -1.53
ATM-204ENST00000524792 SMARCA2P51531 1590 aa5.52□□□□□ -1.53
ATM-204ENST00000524792 HDGFP51858 240 aaKnown RBP5.51□□□□□ -1.53
ATM-204ENST00000524792 PLEKHD1A6NEE1 506 aa5.5□□□□□ -1.53
ATM-204ENST00000524792 POLR3GLQ9BT43 218 aa5.5□□□□□ -1.53
ATM-204ENST00000524792 LMOD2Q6P5Q4 547 aa5.5□□□□□ -1.53
ATM-204ENST00000524792 NPM2Q86SE8 214 aaKnown RBP5.5□□□□□ -1.53
ATM-204ENST00000524792 UBAP1LF5GYI3 381 aa5.49□□□□□ -1.53
ATM-204ENST00000524792 KLHL34Q8N239 644 aa5.49□□□□□ -1.53
ATM-204ENST00000524792 CUX2O14529 1486 aa5.48□□□□□ -1.53
ATM-204ENST00000524792 P3H3Q8IVL6 736 aa5.48□□□□□ -1.53
ATM-204ENST00000524792 CSRNP3Q8WYN3 585 aa5.48□□□□□ -1.53
ATM-204ENST00000524792 NUTM2BA6NNL0 878 aaPredicted RBP5.47□□□□□ -1.53
ATM-204ENST00000524792 NUTM2EB1AL46 878 aaPredicted RBP5.47□□□□□ -1.53
ATM-204ENST00000524792 PRKCSHP14314 528 aaPredicted RBP5.47□□□□□ -1.53
ATM-204ENST00000524792 NUTM2DQ5VT03 806 aaPredicted RBP5.47□□□□□ -1.53
ATM-204ENST00000524792 ERICH6Q7L0X2 663 aa5.47□□□□□ -1.53
ATM-204ENST00000524792 NUTM2AQ8IVF1 878 aaPredicted RBP5.47□□□□□ -1.53
ATM-204ENST00000524792 ZBTB7CA1YPR0 619 aa5.47□□□□□ -1.53
ATM-204ENST00000524792 EID1Q9Y6B2 187 aa5.46□□□□□ -1.54
ATM-204ENST00000524792 TOM1O60784 492 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms