Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV3D-20A0A0C4DH25 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV3D-20A0A0C4DH25 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV3D-20A0A0C4DH25 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IGKV3D-20A0A0C4DH25 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV3D-20A0A0C4DH25 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV3D-20A0A0C4DH25 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.44■□□□□ 0.54
IGKV3D-20A0A0C4DH25 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV3D-20A0A0C4DH25 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGKV3D-20A0A0C4DH25 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 LINC00273-201ENST00000539813 1452 ntBASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 AC005559.1-201ENST00000589661 871 ntBASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGKV3D-20A0A0C4DH25 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 AC108673.1-201ENST00000510422 1159 ntBASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.41■□□□□ 0.54
IGKV3D-20A0A0C4DH25 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IGKV3D-20A0A0C4DH25 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.4■□□□□ 0.54
IGKV3D-20A0A0C4DH25 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV3D-20A0A0C4DH25 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
IGKV3D-20A0A0C4DH25 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGKV3D-20A0A0C4DH25 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
IGKV3D-20A0A0C4DH25 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 MIR6090-201ENST00000622481 60 ntBASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 AC020928.2-201ENST00000588717 2197 ntBASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGKV3D-20A0A0C4DH25 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGKV3D-20A0A0C4DH25 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.38■□□□□ 0.53
IGKV3D-20A0A0C4DH25 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
IGKV3D-20A0A0C4DH25 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGKV3D-20A0A0C4DH25 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
IGKV3D-20A0A0C4DH25 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGKV3D-20A0A0C4DH25 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.37■□□□□ 0.53
IGKV3D-20A0A0C4DH25 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGKV3D-20A0A0C4DH25 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGKV3D-20A0A0C4DH25 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IGKV3D-20A0A0C4DH25 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.36■□□□□ 0.53
IGKV3D-20A0A0C4DH25 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.35■□□□□ 0.53
IGKV3D-20A0A0C4DH25 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 SUZ12P1-203ENST00000578195 985 ntBASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 DUSP8P4-201ENST00000399538 1761 ntBASIC18.34■□□□□ 0.53
IGKV3D-20A0A0C4DH25 AC092803.2-201ENST00000564287 1899 ntBASIC18.33■□□□□ 0.53
IGKV3D-20A0A0C4DH25 AP004609.3-201ENST00000610705 1884 ntBASIC18.33■□□□□ 0.53
IGKV3D-20A0A0C4DH25 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV3D-20A0A0C4DH25 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV3D-20A0A0C4DH25 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV3D-20A0A0C4DH25 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IGKV3D-20A0A0C4DH25 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
IGKV3D-20A0A0C4DH25 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IGKV3D-20A0A0C4DH25 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV3D-20A0A0C4DH25 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
IGKV3D-20A0A0C4DH25 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.3■□□□□ 0.52
IGKV3D-20A0A0C4DH25 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
IGKV3D-20A0A0C4DH25 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV3D-20A0A0C4DH25 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3D-20A0A0C4DH25 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3D-20A0A0C4DH25 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3D-20A0A0C4DH25 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3D-20A0A0C4DH25 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3D-20A0A0C4DH25 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3D-20A0A0C4DH25 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGKV3D-20A0A0C4DH25 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 DUX4L28-201ENST00000623687 678 ntBASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGKV3D-20A0A0C4DH25 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms