Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 ST7-AS1-201ENST00000456775 1889 ntBASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 AC026202.3-201ENST00000600805 1127 ntBASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC187A0A096LP49 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC187A0A096LP49 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC187A0A096LP49 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC187A0A096LP49 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC187A0A096LP49 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC187A0A096LP49 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC187A0A096LP49 AC025884.2-201ENST00000553429 711 ntBASIC23.89■■□□□ 1.41
CCDC187A0A096LP49 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CCDC187A0A096LP49 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC187A0A096LP49 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.88■■□□□ 1.41
CCDC187A0A096LP49 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC187A0A096LP49 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC187A0A096LP49 RP9P-202ENST00000450133 1212 ntBASIC23.87■■□□□ 1.41
CCDC187A0A096LP49 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC187A0A096LP49 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC187A0A096LP49 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC187A0A096LP49 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC187A0A096LP49 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC187A0A096LP49 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC187A0A096LP49 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC187A0A096LP49 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC187A0A096LP49 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC187A0A096LP49 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC187A0A096LP49 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC187A0A096LP49 DUX4L9-201ENST00000449051 1259 ntBASIC23.83■■□□□ 1.41
CCDC187A0A096LP49 AC093536.1-201ENST00000569153 554 ntBASIC23.83■■□□□ 1.41
CCDC187A0A096LP49 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC187A0A096LP49 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC187A0A096LP49 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC187A0A096LP49 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC187A0A096LP49 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 AL035685.1-201ENST00000636663 812 ntBASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC187A0A096LP49 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC187A0A096LP49 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC187A0A096LP49 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC187A0A096LP49 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC187A0A096LP49 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 AL451085.2-201ENST00000605085 799 ntBASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 RAP2CP1-202ENST00000605179 643 ntBASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC187A0A096LP49 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 MIR3960-201ENST00000583311 91 ntBASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 AC074183.2-201ENST00000623112 922 ntBASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CCDC187A0A096LP49 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC187A0A096LP49 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC187A0A096LP49 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.77■■□□□ 1.4
CCDC187A0A096LP49 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC187A0A096LP49 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC187A0A096LP49 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC187A0A096LP49 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC187A0A096LP49 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC187A0A096LP49 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC187A0A096LP49 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCDC187A0A096LP49 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CCDC187A0A096LP49 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 AC139795.1-202ENST00000500444 432 ntBASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 AC010980.1-201ENST00000587192 1142 ntBASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms