Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV30A0A087WSZ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV30A0A087WSZ9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV30A0A087WSZ9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV30A0A087WSZ9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV30A0A087WSZ9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV30A0A087WSZ9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV30A0A087WSZ9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.43■□□□□ 0.7
TRAV30A0A087WSZ9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV30A0A087WSZ9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TRAV30A0A087WSZ9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV30A0A087WSZ9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV30A0A087WSZ9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 AC021231.2-201ENST00000594613 730 ntBASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV30A0A087WSZ9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV30A0A087WSZ9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV30A0A087WSZ9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV30A0A087WSZ9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV30A0A087WSZ9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRAV30A0A087WSZ9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV30A0A087WSZ9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAV30A0A087WSZ9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV30A0A087WSZ9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV30A0A087WSZ9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV30A0A087WSZ9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV30A0A087WSZ9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV30A0A087WSZ9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV30A0A087WSZ9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TRAV30A0A087WSZ9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV30A0A087WSZ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV30A0A087WSZ9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV30A0A087WSZ9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV30A0A087WSZ9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV30A0A087WSZ9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV30A0A087WSZ9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV30A0A087WSZ9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV30A0A087WSZ9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV30A0A087WSZ9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV30A0A087WSZ9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAV30A0A087WSZ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV30A0A087WSZ9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV30A0A087WSZ9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV30A0A087WSZ9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAV30A0A087WSZ9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV30A0A087WSZ9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAV30A0A087WSZ9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV30A0A087WSZ9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 WHAMMP3-201ENST00000611636 1609 ntBASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 AL449106.1-201ENST00000608517 1980 ntBASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV30A0A087WSZ9 AP004609.3-201ENST00000610705 1884 ntBASIC19.28■□□□□ 0.68
TRAV30A0A087WSZ9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV30A0A087WSZ9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV30A0A087WSZ9 LINC01971-201ENST00000617888 1048 ntBASIC19.28■□□□□ 0.68
TRAV30A0A087WSZ9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV30A0A087WSZ9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV30A0A087WSZ9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV30A0A087WSZ9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.27■□□□□ 0.67
TRAV30A0A087WSZ9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV30A0A087WSZ9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV30A0A087WSZ9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV30A0A087WSZ9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV30A0A087WSZ9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV30A0A087WSZ9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms