Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 AC009533.2-201ENST00000543664 586 ntBASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
BIVM-ERCC5R4GMW8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
BIVM-ERCC5R4GMW8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 AL139288.1-201ENST00000623748 933 ntBASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 MYLKP1-201ENST00000509077 1580 ntBASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
BIVM-ERCC5R4GMW8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC012640.2-201ENST00000561606 901 ntBASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC021087.4-201ENST00000563761 564 ntBASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC30.62■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 AP005117.1-201ENST00000584346 1413 ntBASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 COX10-202ENST00000429152 875 ntTSL 2 BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC132008.2-207ENST00000454517 770 ntBASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC034105.1-201ENST00000563488 319 ntBASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC025062.2-201ENST00000605477 670 ntBASIC30.61■■■□□ 2.49
BIVM-ERCC5R4GMW8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 LINC01126-201ENST00000623515 1646 ntBASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 ABCD1P5-201ENST00000445663 754 ntBASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 MTCL1P1-201ENST00000446207 792 ntBASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 MTDHP3-201ENST00000594186 672 ntBASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
BIVM-ERCC5R4GMW8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC30.58■■■□□ 2.49
BIVM-ERCC5R4GMW8 BX842568.4-201ENST00000421222 227 ntBASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms