Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.06■□□□□ 0.96
CLIC4Q9Y696 AL163051.1-201ENST00000569214 1512 ntBASIC21.06■□□□□ 0.96
CLIC4Q9Y696 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC4Q9Y696 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 TSPY17P-201ENST00000450329 467 ntBASIC21.05■□□□□ 0.96
CLIC4Q9Y696 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 PHGDH-209ENST00000641074 1780 ntBASIC21.05■□□□□ 0.96
CLIC4Q9Y696 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC4Q9Y696 KRT8P9-201ENST00000558927 1449 ntBASIC21.04■□□□□ 0.96
CLIC4Q9Y696 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC138028.4-201ENST00000564984 1845 ntBASIC21.04■□□□□ 0.96
CLIC4Q9Y696 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC007663.1-201ENST00000438948 1240 ntBASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AL096828.2-201ENST00000567259 1965 ntBASIC21.04■□□□□ 0.96
CLIC4Q9Y696 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC4Q9Y696 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 GMCL1P1-201ENST00000463439 1581 ntBASIC21.03■□□□□ 0.96
CLIC4Q9Y696 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 KRT18P23-201ENST00000435622 1283 ntBASIC21.03■□□□□ 0.96
CLIC4Q9Y696 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC4Q9Y696 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 CYP2D8P-201ENST00000433633 1490 ntBASIC21.02■□□□□ 0.96
CLIC4Q9Y696 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC4Q9Y696 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms