Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 AL121829.2-201ENST00000620908 328 ntBASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB1Q9Y5G3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB1Q9Y5G3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB1Q9Y5G3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGB1Q9Y5G3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGB1Q9Y5G3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 PP12613-201ENST00000424958 2230 ntBASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB1Q9Y5G3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 AP006294.2-201ENST00000641667 209 ntBASIC16.88■□□□□ 0.29
PCDHGB1Q9Y5G3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms