Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 MIR3180-4-201ENST00000582223 153 ntBASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 AL031432.5-201ENST00000641059 760 ntBASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB13Q9Y5F0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AL163051.1-201ENST00000569214 1512 ntBASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AC073508.3-201ENST00000619697 1419 ntBASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AC005521.1-201ENST00000393351 872 ntBASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AC024243.1-201ENST00000609234 778 ntBASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB13Q9Y5F0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 BX664615.1-201ENST00000443558 458 ntBASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 AC009065.1-201ENST00000564055 1225 ntBASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 AC140113.3-201ENST00000605663 199 ntBASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB13Q9Y5F0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB13Q9Y5F0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms