Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NINLQ9Y2I6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
NINLQ9Y2I6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 VENTXP7-201ENST00000475503 772 ntBASIC25.15■■□□□ 1.62
NINLQ9Y2I6 AC104819.1-201ENST00000504587 486 ntBASIC25.15■■□□□ 1.62
NINLQ9Y2I6 AP000867.3-201ENST00000524675 377 ntBASIC25.15■■□□□ 1.62
NINLQ9Y2I6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 IGHV3-41-201ENST00000613121 348 ntBASIC25.15■■□□□ 1.62
NINLQ9Y2I6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.15■■□□□ 1.62
NINLQ9Y2I6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NINLQ9Y2I6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NINLQ9Y2I6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NINLQ9Y2I6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
NINLQ9Y2I6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 AL031598.1-201ENST00000561511 1773 ntBASIC25.14■■□□□ 1.61
NINLQ9Y2I6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.14■■□□□ 1.61
NINLQ9Y2I6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 IGHV3-47-201ENST00000425060 335 ntBASIC25.13■■□□□ 1.61
NINLQ9Y2I6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.13■■□□□ 1.61
NINLQ9Y2I6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 AP005901.3-202ENST00000581653 237 ntBASIC25.12■■□□□ 1.61
NINLQ9Y2I6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
NINLQ9Y2I6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 AC074051.2-201ENST00000565115 352 ntBASIC25.11■■□□□ 1.61
NINLQ9Y2I6 AC124864.1-201ENST00000623408 392 ntBASIC25.11■■□□□ 1.61
NINLQ9Y2I6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NINLQ9Y2I6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 IFNL4P1-201ENST00000607083 540 ntBASIC25.1■■□□□ 1.61
NINLQ9Y2I6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.1■■□□□ 1.61
NINLQ9Y2I6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms