Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.27■■□□□ 1.15
ZC3H4Q9UPT8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AL356309.3-201ENST00000624132 1934 ntBASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 ABCD1P5-201ENST00000445663 754 ntBASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AC113404.2-201ENST00000507884 177 ntBASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3H4Q9UPT8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 KRT8P32-201ENST00000512863 1461 ntBASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 AC254562.1-201ENST00000417586 456 ntBASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 AC011467.2-201ENST00000598425 242 ntBASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H4Q9UPT8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 MCCD1P2-201ENST00000423228 335 ntBASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H4Q9UPT8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 AC020907.5-201ENST00000624372 1936 ntBASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 AL645939.2-201ENST00000427340 991 ntBASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 AC008687.5-201ENST00000593746 558 ntBASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 AC107918.4-202ENST00000641623 219 ntBASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H4Q9UPT8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H4Q9UPT8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H4Q9UPT8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H4Q9UPT8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H4Q9UPT8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms