Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AC091304.2-201ENST00000564639 760 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AL121894.2-201ENST00000602977 491 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 SLC25A24-204ENST00000569674 2357 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 NSUN5P1-202ENST00000421140 1535 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 NSUN5P2-203ENST00000457352 1529 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 AC004870.1-201ENST00000315132 882 ntBASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 KRT18P65-201ENST00000439811 1286 ntBASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 AC068472.1-201ENST00000474589 881 ntBASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPO2Q9UMS6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 LINC00167-201ENST00000530583 1419 ntBASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 UNC93B7-201ENST00000509439 705 ntBASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 FOSL1P1-201ENST00000511041 816 ntBASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 LINC01711-201ENST00000598340 967 ntBASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 IFNL4P1-201ENST00000607083 540 ntBASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SYNPO2Q9UMS6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 KRT16P4-201ENST00000453883 522 ntBASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 AC099336.1-202ENST00000602961 463 ntBASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 CROCCP3-202ENST00000420820 1947 ntBASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPO2Q9UMS6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SYNPO2Q9UMS6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.14■□□□□ 0.98
SYNPO2Q9UMS6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 AC091607.1-201ENST00000490318 1060 ntBASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms