Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TMCC3Q9ULS5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 AC106820.2-201ENST00000563775 3264 ntBASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMCC3Q9ULS5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 KRT16P5-201ENST00000455284 522 ntBASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 MTDHP1-201ENST00000605323 784 ntBASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 GNAS-203ENST00000306120 1878 ntBASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMCC3Q9ULS5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.11■□□□□ 0.33
TMCC3Q9ULS5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms