Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 KRT89P-201ENST00000620027 1478 ntBASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 MIR3180-1-201ENST00000580374 94 ntBASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 MIR3180-3-201ENST00000584616 94 ntBASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 AC005332.3-201ENST00000589904 676 ntBASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCF1Q9UBD9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 IGHGP-201ENST00000390555 1178 ntBASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 CLEC4GP1-201ENST00000596555 870 ntBASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 GPR32P1-201ENST00000601788 811 ntBASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 MYLKP1-201ENST00000509077 1580 ntBASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCF1Q9UBD9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 AC009102.3-201ENST00000623118 1491 ntBASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 DUSP5P1-201ENST00000441325 1139 ntBASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 AP002414.4-201ENST00000589764 1148 ntBASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 AC092329.2-201ENST00000598402 547 ntBASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCF1Q9UBD9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms