Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VAPAQ9P0L0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPAQ9P0L0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VAPAQ9P0L0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 MIR564-202ENST00000385049 94 ntBASIC17.45■□□□□ 0.38
VAPAQ9P0L0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 B3GAT3P1-201ENST00000471720 806 ntBASIC17.45■□□□□ 0.38
VAPAQ9P0L0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPAQ9P0L0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 PHGDH-209ENST00000641074 1780 ntBASIC17.44■□□□□ 0.38
VAPAQ9P0L0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ID1-201ENST00000376105 1233 ntBASIC17.44■□□□□ 0.38
VAPAQ9P0L0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 AF186192.3-201ENST00000583427 947 ntBASIC17.44■□□□□ 0.38
VAPAQ9P0L0 AC006058.3-201ENST00000606217 1069 ntBASIC17.44■□□□□ 0.38
VAPAQ9P0L0 MIR6786-201ENST00000616843 113 ntBASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPAQ9P0L0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 AP000593.1-201ENST00000393668 712 ntBASIC17.43■□□□□ 0.38
VAPAQ9P0L0 AL023284.2-201ENST00000405850 579 ntBASIC17.43■□□□□ 0.38
VAPAQ9P0L0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.43■□□□□ 0.38
VAPAQ9P0L0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 AC139713.2-201ENST00000641328 2723 ntBASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms