Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 AL160286.2-201ENST00000567150 934 ntBASIC17.87■□□□□ 0.45
NDE1Q9NXR1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 CROCCP1-201ENST00000426910 5675 ntBASIC17.87■□□□□ 0.45
NDE1Q9NXR1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDE1Q9NXR1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.86■□□□□ 0.45
NDE1Q9NXR1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.85■□□□□ 0.45
NDE1Q9NXR1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDE1Q9NXR1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms