Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 FAM197Y1-201ENST00000421178 764 ntBASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 MIR4785-201ENST00000585005 73 ntBASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 MTMR9LP-203ENST00000426597 1545 ntBASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 KRT8P41-201ENST00000533985 1514 ntBASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LIN7CQ9NUP9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 AC112777.1-201ENST00000540175 1423 ntBASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 AC004980.1-204ENST00000429707 299 ntBASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 MIR4497-201ENST00000583208 89 ntBASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 AC068587.9-201ENST00000641814 219 ntBASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 KRT17P2-201ENST00000300992 1314 ntBASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LIN7CQ9NUP9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LIN7CQ9NUP9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms