Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF4Q9NR80 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF4Q9NR80 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF4Q9NR80 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF4Q9NR80 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 MCCD1P1-208ENST00000445732 328 ntBASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 AC005332.8-201ENST00000622750 2735 ntBASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ARHGEF4Q9NR80 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 AC069148.1-201ENST00000608741 768 ntBASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 AC036111.1-201ENST00000533973 1582 ntBASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF4Q9NR80 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 AC104581.1-202ENST00000635932 2618 ntBASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 AC034232.1-201ENST00000506026 1064 ntBASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF4Q9NR80 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms