Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 TSSC2-201ENST00000450217 709 ntBASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1G1Q9HCP0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1G1Q9HCP0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 AL353692.3-201ENST00000407031 1396 ntBASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 CHCHD2P8-201ENST00000429873 447 ntBASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 AP002383.4-201ENST00000442518 975 ntBASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 AC004408.2-201ENST00000623613 2777 ntBASIC19.21■□□□□ 0.67
CSNK1G1Q9HCP0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
CSNK1G1Q9HCP0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 AC004263.2-201ENST00000617183 678 ntBASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 AC093458.2-201ENST00000623150 629 ntBASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1G1Q9HCP0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms