Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 CYP2D8P-201ENST00000433633 1490 ntBASIC19.06■□□□□ 0.64
PCDH9Q9HC56 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.06■□□□□ 0.64
PCDH9Q9HC56 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 NAPSB-206ENST00000562112 1266 ntBASIC19.06■□□□□ 0.64
PCDH9Q9HC56 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH9Q9HC56 AC067852.2-201ENST00000590513 2313 ntBASIC19.06■□□□□ 0.64
PCDH9Q9HC56 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 SLC25A1P2-201ENST00000430693 912 ntBASIC19.05■□□□□ 0.64
PCDH9Q9HC56 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 AC008622.2-201ENST00000617006 1229 ntBASIC19.05■□□□□ 0.64
PCDH9Q9HC56 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 ESPNP-201ENST00000270691 2015 ntBASIC19.05■□□□□ 0.64
PCDH9Q9HC56 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH9Q9HC56 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.04■□□□□ 0.64
PCDH9Q9HC56 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 CCR12P-201ENST00000446203 998 ntBASIC19.04■□□□□ 0.64
PCDH9Q9HC56 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 AC010947.1-201ENST00000623454 693 ntBASIC19.04■□□□□ 0.64
PCDH9Q9HC56 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH9Q9HC56 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 TSPY14P-201ENST00000303979 915 ntBASIC19.03■□□□□ 0.64
PCDH9Q9HC56 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH9Q9HC56 AP000593.1-201ENST00000393668 712 ntBASIC19.03■□□□□ 0.64
PCDH9Q9HC56 AC087499.1-201ENST00000418141 1075 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms