Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 AC012317.2-201ENST00000623305 2251 ntBASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SND1-IT1Q9HBX3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AC004911.1-201ENST00000416316 871 ntBASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TSPY21P-201ENST00000433481 731 ntBASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AC135776.1-201ENST00000319817 2481 ntBASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
SND1-IT1Q9HBX3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms