Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 AC100791.3-201ENST00000617619 330 ntBASIC17.59■□□□□ 0.41
VCX3BQ9H321 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
VCX3BQ9H321 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCX3BQ9H321 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.58■□□□□ 0.41
VCX3BQ9H321 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
VCX3BQ9H321 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VCX3BQ9H321 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCX3BQ9H321 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCX3BQ9H321 AC022211.2-201ENST00000585075 2527 ntBASIC17.58■□□□□ 0.41
VCX3BQ9H321 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.58■□□□□ 0.41
VCX3BQ9H321 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCX3BQ9H321 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 AL162412.1-201ENST00000567129 965 ntBASIC17.58■□□□□ 0.4
VCX3BQ9H321 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX3BQ9H321 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.58■□□□□ 0.4
VCX3BQ9H321 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCX3BQ9H321 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX3BQ9H321 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCX3BQ9H321 HEIH-201ENST00000623091 1652 ntBASIC17.58■□□□□ 0.4
VCX3BQ9H321 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCX3BQ9H321 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
VCX3BQ9H321 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
VCX3BQ9H321 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCX3BQ9H321 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 AC063926.3-201ENST00000624734 5658 ntBASIC17.56■□□□□ 0.4
VCX3BQ9H321 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 AP001094.4-201ENST00000579008 2176 ntBASIC17.56■□□□□ 0.4
VCX3BQ9H321 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCX3BQ9H321 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VCX3BQ9H321 KRT8P8-201ENST00000434750 1448 ntBASIC17.55■□□□□ 0.4
VCX3BQ9H321 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCX3BQ9H321 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
VCX3BQ9H321 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms