Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 AC138028.4-201ENST00000564984 1845 ntBASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXP3Q9BZS1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 AC008556.1-201ENST00000610908 2040 ntBASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 AL445228.2-201ENST00000605589 952 ntBASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FOXP3Q9BZS1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 NIFKP9-201ENST00000419265 221 ntBASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 KRT18P41-201ENST00000518924 1277 ntBASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 AC145285.6-201ENST00000604632 637 ntBASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 AC138932.1-201ENST00000534164 6830 ntBASIC19.04■□□□□ 0.64
FOXP3Q9BZS1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 KRT16P1-201ENST00000399124 1418 ntBASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 KSR1P1-201ENST00000446298 240 ntBASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 AC005363.2-201ENST00000618631 242 ntBASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 AL445675.2-201ENST00000620291 557 ntBASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXP3Q9BZS1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms