Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 OR7E14P-202ENST00000530490 1290 ntBASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 AL359881.2-201ENST00000602973 570 ntBASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 KRT8P3-201ENST00000519669 1449 ntBASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNTNAP3Q9BZ76 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 TREX1-205ENST00000625293 1783 ntBASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNTNAP3Q9BZ76 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 IGHGP-201ENST00000390555 1178 ntBASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 GAPDHP21-201ENST00000450301 1010 ntBASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 Z92544.3-201ENST00000624747 417 ntBASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.52■□□□□ 0.4
CNTNAP3Q9BZ76 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNTNAP3Q9BZ76 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms