Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 AC018695.7-201ENST00000624587 2492 ntBASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP4Q9BWG4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP4Q9BWG4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 AL391005.1-201ENST00000623953 2435 ntBASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP4Q9BWG4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms