Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.01□□□□□ -0.17
VGLL1Q99990 AL445675.2-201ENST00000620291 557 ntBASIC14.01□□□□□ -0.17
VGLL1Q99990 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.01□□□□□ -0.17
VGLL1Q99990 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VGLL1Q99990 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VGLL1Q99990 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VGLL1Q99990 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14□□□□□ -0.17
VGLL1Q99990 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14□□□□□ -0.17
VGLL1Q99990 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 APTR-205ENST00000447009 902 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14□□□□□ -0.17
VGLL1Q99990 PRSS44-201ENST00000515154 1146 ntBASIC14□□□□□ -0.17
VGLL1Q99990 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14□□□□□ -0.17
VGLL1Q99990 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VGLL1Q99990 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
VGLL1Q99990 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VGLL1Q99990 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14□□□□□ -0.17
VGLL1Q99990 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VGLL1Q99990 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.99□□□□□ -0.17
VGLL1Q99990 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VGLL1Q99990 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.99□□□□□ -0.17
VGLL1Q99990 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VGLL1Q99990 AC004980.1-204ENST00000429707 299 ntBASIC13.99□□□□□ -0.17
VGLL1Q99990 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.99□□□□□ -0.17
VGLL1Q99990 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.99□□□□□ -0.17
VGLL1Q99990 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VGLL1Q99990 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.99□□□□□ -0.17
VGLL1Q99990 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms