Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.96■□□□□ 0.47
PKP4Q99569 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.96■□□□□ 0.47
PKP4Q99569 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.96■□□□□ 0.47
PKP4Q99569 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PKP4Q99569 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.96■□□□□ 0.47
PKP4Q99569 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.96■□□□□ 0.47
PKP4Q99569 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.96■□□□□ 0.47
PKP4Q99569 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.96■□□□□ 0.47
PKP4Q99569 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.96■□□□□ 0.47
PKP4Q99569 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.96■□□□□ 0.47
PKP4Q99569 AL023973.1-201ENST00000624619 620 ntBASIC17.96■□□□□ 0.47
PKP4Q99569 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.96■□□□□ 0.47
PKP4Q99569 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.96■□□□□ 0.47
PKP4Q99569 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PKP4Q99569 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.96■□□□□ 0.46
PKP4Q99569 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PKP4Q99569 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PKP4Q99569 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PKP4Q99569 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.95■□□□□ 0.46
PKP4Q99569 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.95■□□□□ 0.46
PKP4Q99569 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 AP000523.1-201ENST00000398242 1049 ntBASIC17.95■□□□□ 0.46
PKP4Q99569 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 COX11P1-201ENST00000489116 835 ntBASIC17.95■□□□□ 0.46
PKP4Q99569 AC010240.3-201ENST00000607688 395 ntBASIC17.95■□□□□ 0.46
PKP4Q99569 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
PKP4Q99569 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PKP4Q99569 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PKP4Q99569 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PKP4Q99569 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
PKP4Q99569 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
PKP4Q99569 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP4Q99569 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP4Q99569 BX664615.1-201ENST00000443558 458 ntBASIC17.94■□□□□ 0.46
PKP4Q99569 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP4Q99569 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.94■□□□□ 0.46
PKP4Q99569 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PKP4Q99569 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP4Q99569 GCSHP2-201ENST00000560971 527 ntBASIC17.94■□□□□ 0.46
PKP4Q99569 AC140113.3-201ENST00000605663 199 ntBASIC17.94■□□□□ 0.46
PKP4Q99569 AC139887.4-201ENST00000607877 719 ntBASIC17.94■□□□□ 0.46
PKP4Q99569 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.94■□□□□ 0.46
PKP4Q99569 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.94■□□□□ 0.46
PKP4Q99569 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP4Q99569 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP4Q99569 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP4Q99569 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms