Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 AC009102.3-201ENST00000623118 1491 ntBASIC21.83■■□□□ 1.09
NEK1Q96PY6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 AC012306.2-201ENST00000609350 630 ntBASIC21.83■■□□□ 1.09
NEK1Q96PY6 AC133561.5-201ENST00000635547 218 ntBASIC21.83■■□□□ 1.09
NEK1Q96PY6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NEK1Q96PY6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.83■■□□□ 1.09
NEK1Q96PY6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NEK1Q96PY6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.83■■□□□ 1.08
NEK1Q96PY6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.83■■□□□ 1.08
NEK1Q96PY6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NEK1Q96PY6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NEK1Q96PY6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
NEK1Q96PY6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 NEK4P2-201ENST00000580004 1012 ntBASIC21.82■■□□□ 1.08
NEK1Q96PY6 AC024243.1-201ENST00000609234 778 ntBASIC21.82■■□□□ 1.08
NEK1Q96PY6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NEK1Q96PY6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.82■■□□□ 1.08
NEK1Q96PY6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 SLC25A3P1-201ENST00000443844 931 ntBASIC21.81■■□□□ 1.08
NEK1Q96PY6 SEC1P-202ENST00000473944 940 ntBASIC21.81■■□□□ 1.08
NEK1Q96PY6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 AL138966.2-201ENST00000621997 464 ntBASIC21.81■■□□□ 1.08
NEK1Q96PY6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.81■■□□□ 1.08
NEK1Q96PY6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NEK1Q96PY6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
NEK1Q96PY6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 GMCL1P1-201ENST00000463439 1581 ntBASIC21.8■■□□□ 1.08
NEK1Q96PY6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NEK1Q96PY6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms