Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 HBZP1-201ENST00000354915 429 ntBASIC20.55■□□□□ 0.88
SCLT1Q96NL6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 AC116407.4-201ENST00000623319 1061 ntBASIC20.55■□□□□ 0.88
SCLT1Q96NL6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 AP000974.1-201ENST00000623909 2387 ntBASIC20.54■□□□□ 0.88
SCLT1Q96NL6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 AL645929.1-201ENST00000420084 975 ntBASIC20.54■□□□□ 0.88
SCLT1Q96NL6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SCLT1Q96NL6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 MIR564-202ENST00000385049 94 ntBASIC20.53■□□□□ 0.88
SCLT1Q96NL6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.53■□□□□ 0.88
SCLT1Q96NL6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 MIR3917-201ENST00000580971 93 ntBASIC20.52■□□□□ 0.88
SCLT1Q96NL6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 AC034236.2-201ENST00000606662 1610 ntBASIC20.52■□□□□ 0.88
SCLT1Q96NL6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
SCLT1Q96NL6 KRT8P7-201ENST00000533003 1432 ntBASIC20.52■□□□□ 0.87
SCLT1Q96NL6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.52■□□□□ 0.87
SCLT1Q96NL6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms