Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
HPS1Q92902 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS1Q92902 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.86■□□□□ 0.29
HPS1Q92902 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HPS1Q92902 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS1Q92902 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS1Q92902 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 AC239809.2-201ENST00000415381 517 ntBASIC16.85■□□□□ 0.29
HPS1Q92902 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.85■□□□□ 0.29
HPS1Q92902 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.85■□□□□ 0.29
HPS1Q92902 Z99916.2-201ENST00000604037 246 ntBASIC16.85■□□□□ 0.29
HPS1Q92902 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS1Q92902 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HPS1Q92902 AC012317.2-201ENST00000623305 2251 ntBASIC16.85■□□□□ 0.29
HPS1Q92902 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS1Q92902 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 AD000864.1-201ENST00000624076 2295 ntBASIC16.84■□□□□ 0.29
HPS1Q92902 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms