Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA4DQ92854 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 AC139887.4-201ENST00000607877 719 ntBASIC19.84■□□□□ 0.77
SEMA4DQ92854 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 AC093677.2-201ENST00000600169 1863 ntBASIC19.84■□□□□ 0.77
SEMA4DQ92854 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA4DQ92854 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA4DQ92854 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4DQ92854 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4DQ92854 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4DQ92854 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 AC117947.1-201ENST00000427448 529 ntBASIC19.83■□□□□ 0.77
SEMA4DQ92854 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
SEMA4DQ92854 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4DQ92854 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SEMA4DQ92854 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 AC011558.1-201ENST00000623459 338 ntBASIC19.83■□□□□ 0.77
SEMA4DQ92854 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.83■□□□□ 0.77
SEMA4DQ92854 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEMA4DQ92854 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEMA4DQ92854 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEMA4DQ92854 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SEMA4DQ92854 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 RCN1P1-201ENST00000400413 996 ntBASIC19.82■□□□□ 0.76
SEMA4DQ92854 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 MIR3917-201ENST00000580971 93 ntBASIC19.82■□□□□ 0.76
SEMA4DQ92854 MIR3180-4-201ENST00000582223 153 ntBASIC19.82■□□□□ 0.76
SEMA4DQ92854 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 AC006011.2-201ENST00000621313 1158 ntBASIC19.82■□□□□ 0.76
SEMA4DQ92854 AL157888.1-201ENST00000631930 593 ntBASIC19.82■□□□□ 0.76
SEMA4DQ92854 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SEMA4DQ92854 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEMA4DQ92854 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 BX664615.1-201ENST00000443558 458 ntBASIC19.81■□□□□ 0.76
SEMA4DQ92854 YBX1P2-201ENST00000489612 999 ntBASIC19.81■□□□□ 0.76
SEMA4DQ92854 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.81■□□□□ 0.76
SEMA4DQ92854 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 AL390961.4-201ENST00000623958 2535 ntBASIC19.81■□□□□ 0.76
SEMA4DQ92854 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEMA4DQ92854 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms