Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 AL135905.2-201ENST00000584934 1404 ntBASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 HEIH-201ENST00000623091 1652 ntBASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 RPS2P4-201ENST00000476944 856 ntBASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RTN4IP1Q8WWV3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 KRT16P1-201ENST00000399124 1418 ntBASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 AC073195.1-201ENST00000607241 877 ntBASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTN4IP1Q8WWV3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 GNAS-203ENST00000306120 1878 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 AC004980.1-204ENST00000429707 299 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 TSPY23P-201ENST00000440136 739 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms